EST details — SGN-E374232

Search information 
Request: 374232Match: SGN-E374232
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180235Clone name: TUS-33-N9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C106628 [cLPP-2-M18] Trace: SGN-T173681 EST: SGN-E362821 Direction: 5' Facility: TIGR
Clone: SGN-C180235 [TUS-33-N9] Trace: SGN-T186847 EST: SGN-E374233 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E374232Length: 713 bp (940 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E374232 [] (trimmed) GACAGGAAACCATTCTTCTCCTGTATTGCAGATATTTAAGTCTGTCAAGTGAAAAAAATTGTTCACTAGTTTATCTAGTGAAGAGCGAGCTTGAA
TTCACTGCTGAAAGACACAAGTATAAGGAGCCAACCTATACAATGATAGGGAAAGATGTATTGTATTGTATCTATGGAGAATTTCAACCAAAAAA
AAATCCTTTAGTATCCACACCTTCCATATCTACACGACCATAACAAACACCTTCAGCACAACCATCTTTAACTGCCTGAACGCGAGTCTGATAAA
CCAGATGATGAAGCAACTGTAGTAGTTTCGCCTATCACTGTCTTCAATTTCTGAGATGAATTATCGCCTGAGAACCCTGAGTCTGACACATCACC
AATGTCAAGGCTGTCTGGAAGCTTTTCAAAATCATCACTAGAGTAGAGCTCAAGCTGATTCAGCATGTCAACCGCAGCATCAATGTCACAACTGT
TTGCCAAATAGACCTCAGAAAGTGACTCATCTGACATTCCAGGAAAAGTCATCTGAAGATAAGCCAAATCCATGAAAGATTCCTCACCCAGAACT
TCTTTACCCATAGTTCCTACTGGACTATGTGATGGCGAGCCATAAGTTGAGAAGTCTTTCAGTTTATACTGATCAGCAATTTGGGGAGTCTGCAG
TTGATTTCGCACAGCTGTCACACCAGGTGCCAACCCAACAGCCTCACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374232] SGN-U581037 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186846 [Download][View] Facility Assigned ID: FA0AAD21CG05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0019 Quality Trim Threshold: 14.5