Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E374240

Search information 
Request: 374240Match: SGN-E374240
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180249Clone name: TUS-33-N23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C106675 [cLPP-2-O19] Trace: SGN-T173807 EST: SGN-E362947 Direction: 5' Facility: TIGR
Clone: SGN-C180249 [TUS-33-N23] Trace: SGN-T186855 EST: SGN-E374241 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E374240Length: 684 bp (881 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E374240 [] (trimmed) GAAGCAAAATGCAACTTCTTGTAACATTCAGTCTACTGCAAACATTTTTTTTTAACAAGGAAGTTTTCTTAGCTGAAATTCCCTTGATTTACAAA
TTACACATGAAAAATATGAAACAAGTAAACTTTTAAGCTAAATGTACTTCCATCCCCCTTTCATTTCCTCCACAATAATATTCTATTAGTTCTTT
TTGCCTAACTTACATTTGTTGAAAATGGGATTTGATGTGTTTATGTATATACTTGCATCCAGAGGCGGATCTAGGGTTGGTTCTTCTCGAATTGT
GTGTATACCAAAAACAAAGATCGTACTGATCATTCTGAACTGGTTGACTCTAGATTCTGGATTTACCTCTGGATCGATCTTTTTGCTTAACCGGA
ACAGCATCCACCCTTCTTAACAGCAGATACATCATCTTTCCCAATGTTAATTGTTTGTCCTCTTGGCACAGAAGTTGGATCATCTCCAATATCAA
GAGCTTTTCGACTAACAACTCGATATATCTGAGTGAGTACTTCTGTGAAGGCATTTTCAACATTGAGTGCCTCAAGTGCAGATGTTTCCATGAAG
AATGTGTTCTCTCTTTCTGCAAAACCGCTCGATTCGCCTGTGGGGACGGCTCGGAGGTGGCGGAGATCCGCCTTGTTTCCGACGAGCATGACGAC
GATGTTTTGGTCTGTGTGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374240] SGN-U584956 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186854 [Download][View] Facility Assigned ID: FA0AAD21CG12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0063 Quality Trim Threshold: 14.5