EST details — SGN-E374281
Search information |
Request: 374281 | Match: SGN-E374281 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C180054 | Clone name: TUS-33-F20 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C87289 [cLET-45-N9] | Trace: SGN-T111817 | EST: SGN-E300645 | Direction: 5' | Facility: TIGR |
Clone: SGN-C180054 [TUS-33-F20] | Trace: SGN-T186896 | EST: SGN-E374282 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E374281 | Length: 701 bp (918 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E374281 [] (trimmed)
ACTCATATATTATACATTCTTATAAATAGCAACCATACAACTCTGCACTTGAGAAAGCTCAAATGCTGGTATTCATGGCATACTTGAAGATCAGA
AAACAAACAACAATTGTGTTTTCAAGAAGTAAAACTGGAACTGTACAGGCATGTACAAATTAGGAGATGCAATTAAAAAGCTCCATTTTTTTTTG
GCTAATCTTATCTAACTTAGCTTCAACCCCTGCACCACAATGACTCGGTCGGGTTCTTCTAAATCAGGAAAGGTGATAAAGTAATCCACCTGCAT
TTCTAAATCTAGCGAGACCAATTACTTTATCTTTAGTATGATTCAATCCCCCAATGGAAGCATTGATCATCTACCTTATATGAGTATCATAGTGA
TCAAAAACATTATCTGGCACGATCAAGGGTAGCTTATCTATAAACATGAATAGCCGCCTCAGATTCTCCCTTGTTATCATTGACATGTCCACGAT
GTCTTTGTTGTCCATGTATACCCACAGATCACTGGAGTTAACCCTTTTAAGGCTATCGCGGCAAAAAGGGCAGGATTGTGACCTTGAACGCCATT
CACGATAGCATTTCAAACACAGGGCGTGATTGCATTTGGGAAGGACAATTTTGCTGTTCATTTCCATGCAGATTCCACATTCCTCTTCCCTTTCA
ATGTCAGAGTCAGAAGATTGTCTGTAATCCTCATCA
AAACAAACAACAATTGTGTTTTCAAGAAGTAAAACTGGAACTGTACAGGCATGTACAAATTAGGAGATGCAATTAAAAAGCTCCATTTTTTTTTG
GCTAATCTTATCTAACTTAGCTTCAACCCCTGCACCACAATGACTCGGTCGGGTTCTTCTAAATCAGGAAAGGTGATAAAGTAATCCACCTGCAT
TTCTAAATCTAGCGAGACCAATTACTTTATCTTTAGTATGATTCAATCCCCCAATGGAAGCATTGATCATCTACCTTATATGAGTATCATAGTGA
TCAAAAACATTATCTGGCACGATCAAGGGTAGCTTATCTATAAACATGAATAGCCGCCTCAGATTCTCCCTTGTTATCATTGACATGTCCACGAT
GTCTTTGTTGTCCATGTATACCCACAGATCACTGGAGTTAACCCTTTTAAGGCTATCGCGGCAAAAAGGGCAGGATTGTGACCTTGAACGCCATT
CACGATAGCATTTCAAACACAGGGCGTGATTGCATTTGGGAAGGACAATTTTGCTGTTCATTTCCATGCAGATTCCACATTCCTCTTCCCTTTCA
ATGTCAGAGTCAGAAGATTGTCTGTAATCCTCATCA
Unigenes |
Current Unigene builds | |||||
[SGN-E374281] | SGN-U568639 | Tomato 200607 | Build 2 | 25 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T186895 [Download][View] | Facility Assigned ID: FA0AAD21DC10FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.963 | Expected Error Rate: 0.0038 | Quality Trim Threshold: 14.5 |