EST details — SGN-E374390

Search information 
Request: 374390Match: SGN-E374390
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180196Clone name: TUS-33-L18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C106504 [cLPP-2-G22] Trace: SGN-T173832 EST: SGN-E362972 Direction: 5' Facility: TIGR
Clone: SGN-C180196 [TUS-33-L18] Trace: SGN-T187005 EST: SGN-E374391 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E374390Length: 689 bp (929 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E374390 [] (trimmed) AGCCAAGTATGAAGTTCATTATATGGAACAGAGTTCCTGTCTTTTCAGAACATATAGATGCTTCAACACATTCTAACCTAGCATTACAACAGCAA
GTGGGGAGCAGCAGTCGTCCCCCAAAATTGCTCCAAATGCAATATGCTTGTATCTGTCTCAATATGTTTTCTGTATAGTATTATTTTGAGTACTA
ATATAGCTATGACACTGACCGTGAAAATCCAAGTTCTATGACATACTTATCAATTCAATAGCTCTCCTTGTCAAAAGAATTCTGCTTTCTTCGAT
AATTTAACATTAGACTTCCTGCTTCATGTCTCAGAATACTCTCCCCCATCAAAACTGGTCTCATCCTACACATAGCTTTGAGTAAAACCAAAAAC
TTTTTATCTTCGGCGCTTTGATTCCTTGCGCATCTCAGCCACATAGCTTTCAAAGTTGGACTTCTCCCAAAGCCGTCTTTCAATAAGATCTTCCT
TGGTTGATTCGTCAATAGATATCCATGAATCAAGAGAAGCCCGAAGTGACCTTCGTGTCAAATAGGAGGCATCTTCCCATGAATATGGAGCATGC
TTGACATTGTACCTCCAGAACCAGCATCCATACCACAGTAACAGCTTTCCCAGAGTGTAAGGAAGAAGTATAAAACGGATTCCAATTAGTTCCCA
AACAGAAGGCTTTTCGGTGCCCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374390] SGN-U580616 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187004 [Download][View] Facility Assigned ID: FA0AAD21DF09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0065 Quality Trim Threshold: 14.5