EST details — SGN-E374489

Search information 
Request: 374489Match: SGN-E374489
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181914Clone name: TUS-38-D8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181914 is on microarray TOM1 spot ID 1-1-1.4.10.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82595 [cLET-20-J12] Trace: SGN-T107622 EST: SGN-E295208 Direction: 5' Facility: TIGR
Clone: SGN-C181914 [TUS-38-D8] Trace: SGN-T187760 EST: SGN-E374490 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E374489Length: 422 bp (906 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E374489 [] (trimmed) AATATTTAATCAAGTCACACTTATTTATTCCATTATGTATTGTAAGAGTACATGCATGGGTACATTATAATTAATGAACAGACATGAACCCTAAT
TATTTTTTGACATGTGGCTACTTAATTACTTCATTAATTAACCAATCACAGGCATTGATACAGCAACATCCAAGATGTTTACAGCAATACGAACT
CGAAAACACTTAAAATCAGCTGTGCCTGGAGAACCAATCAATCCTATCCGAACATCAGTTATGAATGGATTTTCCTTTTCAATTATTCCCTTAGC
ATATTGTGCTGGTACACCAATAAGTTCTGGCCACATTCGTTTTCCTTTGCACATCAAGTTAGATTCATATTCCTTTAGAAGTTCGATGACTTCTG
GTCCACCAATTTCTTTTCGTGCCATGAGAGTCTCAAAGGAAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374489] SGN-U581582 Tomato 200607 Build 2 35 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187759 [Download][View] Facility Assigned ID: FA0AAD26DB04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.936 Expected Error Rate: 0.0001 Quality Trim Threshold: 12.5