EST details — SGN-E374534

Search information 
Request: 374534Match: SGN-E374534
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182156Clone name: TUS-38-N10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182156 is on microarray TOM1 spot ID 1-1-7.2.10.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C85164 [cLET-38-E4] Trace: SGN-T109966 EST: SGN-E297887 Direction: 5' Facility: TIGR
Clone: SGN-C182156 [TUS-38-N10] Trace: SGN-T187803 EST: SGN-E374533 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E374534Length: 274 bp (933 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E374534 [] (trimmed) GATTCGTGAAACTGAGGTTGTCAACAAAGGCCATAAAGACCATTGAGAAAAATGGACTTGATGCTGTAGCCAAGAAAGCTGGGATTGATCTCAGC
AAGAAGTAGAACCTGGAACCTGATAGCATATTTGTTTGGACACTAATTTTGATGCCCTCAAAAACCATAACTTTATTTTTTGGCATTGCTTGTTG
ATTTGTAGTTATATGTTTTCATGATATTACTCTCCAAGCATATCTTGATCACCTACTTTCAATGAATATCAACATCATTCTCTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374534] SGN-U582646 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187804 [Download][View] Facility Assigned ID: FA0AAD26DG05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.908 Expected Error Rate: 0.0000 Quality Trim Threshold: 12.5