EST details — SGN-E374597

Search information 
Request: 374597Match: SGN-E374597
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173321Clone name: TUS-15-N7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173321 is on microarray TOM1 spot ID 1-1-2.2.20.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C2058 [cLEC-14-L11] Trace: SGN-T26473 EST: SGN-E204857 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E374597Length: 712 bp (915 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E374597 [] (trimmed) CGTCAATGGCGAAGCTGAAGACGGATTCTCCTCTCTCGCGTCGCATAGTTCTCTCCTTCTTGCGCTTCCTTGATTCTGTGGAACCTGCTGCAGGA
GTTGATTATGAAGGACTTGAGGTTGCTAAGCAATGTCTATCAGAGGCTTTTAAGATTGATCCTTCATCTCATGCCTCAAGTTCAGACTCATTAGT
GGACATATTCAGTTCAGGGGAAGCAGTTGACCAAAGCCAAAGAAGTGTAGATCTTAGGCATGATGTATCTTCATCAGATGCTCCTTGTACATCTT
CAAGGCAGAAGGCCGAAGATAGGACAAAAGAAGCTCACAGTTTTGGTATATCCAAAGATGAGCTCTTTGGGCAGTTTTTTGATGCTCTTGAAAAA
TCTCACTATTTCAGAAGCTTGCCCGATGGAAATGACGATCAGGCTCAGTTGGATAAGGCATCAAGGATATTCCATACTGCTTTGGAGGAGATGCA
AAAATCTGGATGTACTATTTTCAACCGAAACAACCTCGCTGAGATCTTAAAATCACAAGGTAATAAAGCGATGCAGTCAAAACTTTACCCTGATG
CTATTGAGCTGTATTCTTTTGCAATTGCACTTTGTGAAGATAATGCAGTTTACTATTGCAACAGGGCAGCTGCTTTTACCCCAGATCCAACAATA
TGAAGCAGCAGTTCAAAACTGCCAAAAATCTATTGCAATCACCCCCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374597] SGN-U584719 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188827 [Download][View] Facility Assigned ID: FA0AAD3CG04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0040 Quality Trim Threshold: 14.5