EST details — SGN-E374825

Search information 
Request: 374825Match: SGN-E374825
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173009Clone name: TUS-15-A7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173009 is on microarray TOM1 spot ID 1-1-2.1.20.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C1149 [cLEC-11-B12] Trace: SGN-T25757 EST: SGN-E201810 Direction: 5' Facility: TIGR
Clone: SGN-C173009 [TUS-15-A7] Trace: SGN-T188470 EST: SGN-E374826 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E374825Length: 720 bp (899 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E374825 [] (trimmed) ATACTAAAATCTTTACTAAATATTGTTTCTTTGGACAATACAAAATAGCCCTAAACAAATTATATAAATTGGGAGTAAATTTTATACATTCAAAT
ATTGTAAAATTCTATTAATATGGTATTTGTAAAGAAATACAAATAAACTAACAATTCGAAGCGCACATAGGCAGAGTTAGGATTTCAAATTTTAA
TACGTGTACATATTAATGAAATACATTGTTTGAGCATTAGAAGTTGTATTGAATTCGATTGAACCAGAACCCGTATCTGGACTTCTAACTCCGCC
TCCGAAAGCTCAATCCATGTAGCTAGAGTTTATCACATTGTTTTGGTACAAATGATAAAGTTTCTTTATCAAGATCATGAATAACCATCATATTT
TGTTGTTGAACATTTCCAAATATTGACATTCCACTTGAACTTCCCATAGCTAAACAAGCAATTCCCATTCTTGAATCAGCAATCATATAATTTTC
TGCAGGCAAATCCATGTCTGCACCTTCAAAATGAAAAATCAATTTTGGAACTTGTATGTTATTTGTGTTTGATGGCAATTTGAAACAAAGATCTA
GTCCTGTTGAGCTTGAATCATCCACCGCGAGGTTTACCTGGGAAGAAAATTCTTTTTTGAGAAGACTAAATGCACTTTCTTCTAGGTATGTTATG
GTTGTCCCAGAGTCAATTATCATTCCTCCAGAGCCATCTTTGTTGAGTGAAAATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374825] SGN-U583478 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188469 [Download][View] Facility Assigned ID: FA0AAD3AA04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.933 Expected Error Rate: 0.0044 Quality Trim Threshold: 14.5