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EST details — SGN-E375054

Search information 
Request: 375054Match: SGN-E375054
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181077Clone name: TUS-36-A11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181077 is on microarray TOM1 spot ID 1-1-6.1.15.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C20363 [cLED-2-E1] Trace: SGN-T48814 EST: SGN-E228166 Direction: 5' Facility: TIGR
Clone: SGN-C181077 [TUS-36-A11] Trace: SGN-T187613 EST: SGN-E375055 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375054Length: 698 bp (872 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375054 [] (trimmed) ACATCTATTTAGTCGCTTTGATTAGCAAGTTGCAAAGGAACAAAAATACCCCCGTATGTGGGAGAAGTTGACCAAGTCACATAGTGGACGGCTGA
CAACTTGGTTAAAAGGTGTGGCTTCTCAAAATTGCAAAAGGCACAACTTGGGAACTCCAGTTGATGATTAGTGCATCCTTATAATGGAAATAATA
TGAGAAAAATTTACAACTTTCATGTCTTGGACCTTAAAAAACTCAAAAGCACAGCAAAAATCTGGGGTAAAAGAACATCTAATTTCTCAAATTAT
GTTGGCAGTCATCACTCTAGCTAAGGGTTAACTAAAATAATTATGCTACCAAGAAAACAAAGACTATAAATATGAAGTACATTCACATCTAAGCT
ATACTCAACAAGAGAGAGATATAGAGAAAGAGAGATGAAGCAAGCAATATATACAATCTACAATGAACCTGGTTCAACTTGTATGGTTACATGAT
GAATTCTGTATGTGGTGTCACAATATTCCCTAACATTCTGAATAATTTCATAATGGTTGACTCCTGGCTCAGTTACAACGTGACAGGACAAAACA
ATTTTCCCTATAGTGATGGCCCAAACATGTAGGTCATGAACATCTTTTACTCCTGCTAAAGATTTTAGGCCATTCTCGAGTTGAACGATATCAAC
TTTCTTTTGGTGTCCTCTCCATCAATAAGGAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375054] SGN-U581771 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187612 [Download][View] Facility Assigned ID: FA0AAD24AA06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0061 Quality Trim Threshold: 14.5