EST details — SGN-E375192
Search information |
Request: 375192 | Match: SGN-E375192 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C180577 | Clone name: TUS-34-L15 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C180577 is on microarray TOM1 spot ID 1-1-2.4.19.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C31845 [cLEG-15-O8] | Trace: SGN-T66750 | EST: SGN-E251736 | Direction: 5' | Facility: TIGR |
Clone: SGN-C180577 [TUS-34-L15] | Trace: SGN-T187093 | EST: SGN-E375191 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E375192 | Length: 634 bp (917 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E375192 [] (trimmed)
AATTAAAAATATTTATATTTAATCAAATTTTTAAAACAGTAAAGGGGGGCAAAATGGTAATACAACAATTCATTTTCGAACTTCCCCATATAATA
ATATATGAAATATGATAACAGACAAACAAATCTAGCATAAGGCAGTATTTAGCTTCAAAATAAAAAATCAAGCACGATCATCTTGTTGTTTAAAC
ATTATCCACTGAAGCAGGCGCTGCTGGTGTTGCTGGTGCAACTGAAGCTATGGTAAACTGTACACTTCTCGGCTGTCCAAAGTGTAACACAACTG
CAAATTGTGTTGCTGCCAATGCTGCAGCTTCCTCTCTTTGTCTGCGCTGCTGCAAGATGCTGATGGCCCAGAGCATGATGTAGCAGGGTAAAAGA
AAGCCAACTGCCCGGAGTAAAAAAAGCGAAAAGAAAGCAGTTGGATCTTCATCATCTCCATCTGTATCTGTCATTGGTAATGCATGGCGCAATAG
TAAAAGAGCCATCAAAATTAAAGCAGCCGATCGAAAGAAAGCTGCACCACTTGCATTTGCAGAATTGTAATCATCATATTCAGCTTCCAGAAGTT
GGCGTTCAGCCTCTGCAATTGCCAAGACGCGAGGATCATGTAAATTCAAAGGGGTACCAGAGGA
ATATATGAAATATGATAACAGACAAACAAATCTAGCATAAGGCAGTATTTAGCTTCAAAATAAAAAATCAAGCACGATCATCTTGTTGTTTAAAC
ATTATCCACTGAAGCAGGCGCTGCTGGTGTTGCTGGTGCAACTGAAGCTATGGTAAACTGTACACTTCTCGGCTGTCCAAAGTGTAACACAACTG
CAAATTGTGTTGCTGCCAATGCTGCAGCTTCCTCTCTTTGTCTGCGCTGCTGCAAGATGCTGATGGCCCAGAGCATGATGTAGCAGGGTAAAAGA
AAGCCAACTGCCCGGAGTAAAAAAAGCGAAAAGAAAGCAGTTGGATCTTCATCATCTCCATCTGTATCTGTCATTGGTAATGCATGGCGCAATAG
TAAAAGAGCCATCAAAATTAAAGCAGCCGATCGAAAGAAAGCTGCACCACTTGCATTTGCAGAATTGTAATCATCATATTCAGCTTCCAGAAGTT
GGCGTTCAGCCTCTGCAATTGCCAAGACGCGAGGATCATGTAAATTCAAAGGGGTACCAGAGGA
Unigenes |
Current Unigene builds | |||||
[SGN-E375192] | SGN-U573343 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T187094 [Download][View] | Facility Assigned ID: FA0AAD22CF08RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.951 | Expected Error Rate: 0.0111 | Quality Trim Threshold: 12.5 |