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EST details — SGN-E375430

Search information 
Request: 375430Match: SGN-E375430
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180330Clone name: TUS-34-B8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180330 is on microarray TOM1 spot ID 1-1-1.2.19.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C32901 [cLEG-24-H21] Trace: SGN-T67671 EST: SGN-E253423 Direction: 5' Facility: TIGR
Clone: SGN-C180330 [TUS-34-B8] Trace: SGN-T187199 EST: SGN-E375431 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375430Length: 697 bp (894 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375430 [] (trimmed) CCAAAACCTTTTGGGCATTTCATCTCGGGAAATCCTACAACAATAACTATAACTCAGTTCCAAATAAGTAGAATTTCATTTTCACCTTATTTACT
AAATTCATGATAATGATTAGACAAACCTTTAAGTAATAAAGCAAGATTGCCACTTTTTGGAAATTCATCATCACAAGTCTCAAAGACAACAAGGT
TATTTGCAAAAAAATGATGGTGGGACTGGTTCCCTTTGTATAAACGAAACGAGACCGATCAGTCGTCTAATTTTTCAGCATCACTCCACCAAAAG
CTAACTGAAAAGCTTGTCGTGAGAGAGCGGACGTAGGGCCACCATTTAGGGGGGATGTAAAGCATTTCACCTTCCTTTAAAATACAGTCCTGGAA
TTCGAGGTCTAATATATTTGGGAACTTTTTCTCGTCAATGTTGTCTAAATCAACCTGGCTGGAATTACTAAGCATGGTTTCACTATGTGGGTGAA
GCTCATCCGAAAGTGATGCAAAGTAAAGCCGTACATACTTTTTGCCAACAACCTGAGCAAGTATGTTATGGTGCGGATCATGATGCAAAGGCGTC
ACAGTCCCGGTTGGACCAAACCAAGCATTAAGCGACCTAATTTCCCCACCTCCAGTAAAACAATAATCAGGAATAACAATATCTTGTTGTAGCTT
TTGTATTTGATCAAATAATTGATGCTGAGCTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375430] SGN-U576054 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187198 [Download][View] Facility Assigned ID: FA0AAD22DA04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0171 Quality Trim Threshold: 14.5