EST details — SGN-E375558

Search information 
Request: 375558Match: SGN-E375558
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180520Clone name: TUS-34-J6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180520 is on microarray TOM1 spot ID 1-1-3.2.19.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C33776 [cLEG-28-D10] Trace: SGN-T68621 EST: SGN-E253856 Direction: 5' Facility: TIGR
Clone: SGN-C33776 [cLEG-28-D10] Trace: SGN-T68720 EST: SGN-E253955 Direction: 5' Facility: TIGR
Clone: SGN-C180520 [TUS-34-J6] Trace: SGN-T187327 EST: SGN-E375559 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375558Length: 720 bp (934 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375558 [] (trimmed) CCCAAACGATCCGAGTACTATTTACAAAATGCAATGTACATGCTCGCCTTTATTTATGTACAATATATGTAAATCAAAATATCGATCGTGTTTCA
GCTAAAATTCGCGTTCAAACAGTTACTATACATGTTGGTGTAACATCGTGAAGTTCTTACCGTGTTTTTTCTTTGATAACCGAGAAATCTCCGAG
GGCAGATAGCATTTAAAAGAAATGCCTTCTTCTGATCTGCTTCCTTTTTGGAGGGAGTGGTGCTTCACCATTTCCAGGGAATTCCCATTTGACAA
CATCTCCATCCCAAGAAGAGCTAACAAGCATTGGATAAGTAGGGTGCCAGCTACAATCTCTAATGGTCGACCGGTGGTGCTGCAATTTCGCGACT
TGCTCTCCACTTACCAAATCATAGATGTATACGCAGGCATCATGGGATCCTGTGTAAATGTATCTCTGCCCAGTGCTATATTCTGGTGAGAAGTA
GCAGCGAATTAGAGTACGCAAGACAGAATGACCCTTATAAGTGGATATTGACTGATCATAAGGGTGCTTCACGTCTCTAGCTTGAGCAGGGTAGT
CCATCCATCTATAGTCCCACTCATAATTCCTGAACCAGATATTGCGAGCAGCATGAGAAGACATTTTGCGGATATCCCAGAGCTTGATGGACTGA
TCTTTACTGTTAGAAATGAAATAACGACCATCCCCCCGACTATCAAGGAACGTAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375558] SGN-U572324 Tomato 200607 Build 2 34 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187326 [Download][View] Facility Assigned ID: FA0AAD22DE03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.982 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5