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EST details — SGN-E375643

Search information 
Request: 375643Match: SGN-E375643
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180895Clone name: TUS-35-I21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180895 is on microarray TOM1 spot ID 1-1-4.1.17.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C35768 [cLEG-36-D7] Trace: SGN-T70903 EST: SGN-E255620 Direction: 5' Facility: TIGR
Clone: SGN-C180895 [TUS-35-I21] Trace: SGN-T187412 EST: SGN-E375644 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375643Length: 626 bp (911 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375643 [] (trimmed) AAGCTGAAAGAATTACATCCAACATGCTCAATCCTCGAGTAAAAAAGTTACATATTTTAGGCTTTCAATAGTTCAGGCTGCTAACCTACAATTTT
TTAATAATTAAAAATCATTTCTCATTTAATAGCTGCATCAGGGACTAAACTATCCATGTAAGATATGACGTAGTCAAATTGGGGTTCTCTACCCG
TATAGAGATGTAAGAAGTGAAAAACAATTATTGAAACCAGAAGGGGGTAGGTTAGCTCAGCTGATTTTCGTCATTTACTTTATCAGTCGAAGGAT
TGGTCACAAATAGATTTAGTCCTCGTGTCCGTCCTGGGGCCCCTCCTTTAACCAAAGACAAGTCCAAAACATACATGCTATCGGATGCCTTTTCA
TATTCTCCAGCACCACAGTTAATTAAAATCTTCTGATCAATCTTCGAGACTAAATGTTCAACAGGCAAGTCGACTAATTCTGAATATGTTTTATG
AGCAGTCTTCACACCTTCAGTGAGACCCAAGATGTTCTTAAGATTCTCATAACAACTTTCTAGGTCATCGTTCACCAAAATATGATCAAAGAGAC
CGGATGAGTTTCCTTGTTCGAGTTCCGCCCTAGCATTTCGGAGACGCTTTTGGATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375643] SGN-U568369 Tomato 200607 Build 2 22 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187411 [Download][View] Facility Assigned ID: FA0AAD23AE11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0093 Quality Trim Threshold: 14.5