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EST details — SGN-E375644

Search information 
Request: 375644Match: SGN-E375644
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180895Clone name: TUS-35-I21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180895 is on microarray TOM1 spot ID 1-1-4.1.17.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C35768 [cLEG-36-D7] Trace: SGN-T70903 EST: SGN-E255620 Direction: 5' Facility: TIGR
Clone: SGN-C180895 [TUS-35-I21] Trace: SGN-T187411 EST: SGN-E375643 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375644Length: 708 bp (883 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375644 [] (trimmed) CAAAAAAGCAGCTCTTTGGTCCCCTCTCCTTCTCTTCTCTTCCCATTCCTTGTGAAGAGTTGCGCCTACAAATATGGCAAACCCTCCTAAGATTT
CTTCCACCTTCTTCTTCCTCTCATCATCCTCTTCCTCTTCCTCTTCCTCTTCCACCTTCAAACTTGCTGACTTTTCTAACTTTATTCTTTGACAT
TTATAATACAGATCTCTATCTTCTTCATTCAATACATACACAATACAATACCAAATACAAGATTAATAATATTCTTTCTGCCTAACCTTAAATCT
TTGTTTATCAGGTTGAATCTTTTATACAAGGAATACTTACTTACATCTATGGGAGAAGCACCAGCTTTCTTTGCTGATAGTCTCTTGGGAGATTT
TCCAAATGGGATCGATTTGAAATCTAAAGGCCACAAAACAGCTATTTCTATCGGCTCTAAAATTTATGTGATTGGCGGGGCTGATCATGAGTCGA
CAGCGGTAATTGGAGTTCAAATATTTGAGAAATCTAGTGGGGAATGGATAAACCCCACTGTGCTGGGTACTAAACCCAAGGTCTCAAATGGCCAC
TCAGCTGTGCTTTTAAATGGTGATCGTATATTGGTTATTAAGGGCAATTCCAAGTCTGATGAATGCTTTTGGTTTCTTGAGGTGGGCACCTCATT
TATAAGAGACAGGAAAAGACATATGGAACTGAGGTGGTTGCCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375644] SGN-U568368 Tomato 200607 Build 2 65 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187412 [Download][View] Facility Assigned ID: FA0AAD23AE11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0034 Quality Trim Threshold: 14.5