EST details — SGN-E375769

Search information 
Request: 375769Match: SGN-E375769
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173020Clone name: TUS-15-A18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173020 is on microarray TOM1 spot ID 1-1-7.1.20.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C1194 [cLEC-11-D8] Trace: SGN-T25614 EST: SGN-E201667 Direction: 5' Facility: TIGR
Clone: SGN-C173020 [TUS-15-A18] Trace: SGN-T188622 EST: SGN-E375768 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E375769Length: 654 bp (891 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375769 [] (trimmed) TGAAGAAGAAGAAGAAGAAAAAACTCAGCGAAAATGAGACCAAATATTGTTTCTGAGGCGGGACTACAGACAAGGATGGGACAGTGGTGGGAAGG
AATTCCTATCCTTACATCTGCAATAGTGGTTGTTTGTGGGATAATATACTTGGTTTGTCTTCTGGTTGGGTATGACTCATTTGCTGAAGTATGCT
TCTGGCCATCTGCTGTAATTTCTCGATTTCAAGTTTACAGGATTTTCACCTCAATTCTGTTTCATGGTTCTCTACTGCATGTTCTGTTTAATATG
TTAGCTTTGGTCCCTTTGGGTTCAGAGCTGGAGAGGATTATGGGATCAGTGCGCCTGTTATATATAATTGTTCTGTTGGCCATTAGCAATGCCTT
ACTCCATCTTCTTATAGCATTGTTGGTTGCCCATAATCCCCTTCATCCTTATCCATACTTTATGGACGAGTGTGCTATAGGTTTCTCAGGGATCT
TATTTTCAATGATTGTGATGGAGACAAGTCTCAGTGGGGCCCAAACTAGAAGTGTGTTTGGGCTTTTTAATGTGCCAGCTAAATGGTATGCATTG
ATCTTACTGGTGGTTTTTCAGCTTGTTATGACTAATGTCTCTTTACTTGGACATCTTTGTGGTATTTTGTCTTGGATTTGCATA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375769] SGN-U571733 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188623 [Download][View] Facility Assigned ID: FA0AAD3BA09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0066 Quality Trim Threshold: 14.5