EST details — SGN-E375822
Search information |
Request: 375822 | Match: SGN-E375822 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C173310 | Clone name: TUS-15-M20 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C173310 is on microarray TOM1 spot ID 1-1-5.1.19.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C2039 [cLEC-14-K15] | Trace: SGN-T26226 | EST: SGN-E204610 | Direction: 5' | Facility: TIGR |
Clone: SGN-C173310 [TUS-15-M20] | Trace: SGN-T188677 | EST: SGN-E375823 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E375822 | Length: 559 bp (903 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E375822 [] (trimmed)
CCAAAAGGCAACAAAGCTTAACAACAAAAATTTATTTTATGTCATATGGTATAACATGATTTACTATAGCATATAGTAAAAATCTATTTGATTTT
CTGCAAATTTACAACCAAGGAGAGTTGTAGATAGGAGTGGCTACAGATTTAACTTGAAGATACTTATGAAGTCCTTCCATTCCCAAATCTCTTTC
AAAGCCACTGCATTTGTATCCTCCATATGGACAATCCGGATCGAAAGCAAAGTAACAGTTTATCCAGATTACACCAGCTCGAATCGATCTTGAAA
CTGTGTTAGCAATGTTCAAGTTATTGGTCATCACACCTGCTGCTAATCCATAGTTTGTACAGTTAGCTCTCTTGATCACCTCCTCTACCGTCTTA
AACTTCATTACTGCCAGAACAGGTCCAAATATTTCTTCTTTTGCAATTTTCATGTCATCTTCAACATCAATAAATATAGTTGGCTCAATGAAATA
ACCCTTTCTATCCAATGCATTGCCCCCAGTTAGCAGTTTCGCACCCTCCCTCTTGCCATGTTCAATGTACGAAAGTACTCTCTC
CTGCAAATTTACAACCAAGGAGAGTTGTAGATAGGAGTGGCTACAGATTTAACTTGAAGATACTTATGAAGTCCTTCCATTCCCAAATCTCTTTC
AAAGCCACTGCATTTGTATCCTCCATATGGACAATCCGGATCGAAAGCAAAGTAACAGTTTATCCAGATTACACCAGCTCGAATCGATCTTGAAA
CTGTGTTAGCAATGTTCAAGTTATTGGTCATCACACCTGCTGCTAATCCATAGTTTGTACAGTTAGCTCTCTTGATCACCTCCTCTACCGTCTTA
AACTTCATTACTGCCAGAACAGGTCCAAATATTTCTTCTTTTGCAATTTTCATGTCATCTTCAACATCAATAAATATAGTTGGCTCAATGAAATA
ACCCTTTCTATCCAATGCATTGCCCCCAGTTAGCAGTTTCGCACCCTCCCTCTTGCCATGTTCAATGTACGAAAGTACTCTCTC
Unigenes |
Current Unigene builds | |||||
[SGN-E375822] | SGN-U572155 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T188676 [Download][View] | Facility Assigned ID: FA0AAD3BG10FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.947 | Expected Error Rate: 0.0074 | Quality Trim Threshold: 20.5 |