EST details — SGN-E375901

Search information 
Request: 375901Match: SGN-E375901
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173262Clone name: TUS-15-K20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173262 is on microarray TOM1 spot ID 1-1-5.3.19.2 [Order] [Tomato Microarray Database]
See unigene SGN-U575402 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C1945 [cLEC-14-F6] Trace: SGN-T26502 EST: SGN-E204886 Direction: 5' Facility: TIGR
Clone: SGN-C173262 [TUS-15-K20] Trace: SGN-T188754 EST: SGN-E375900 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375901Length: 689 bp (893 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375901 [] (trimmed) CTCTCTTTGGCTCATTCTCCCAGAAAAAAACATTCTCTTCATCCGCCATTAACGCTCGCCGCATCACAAGCTTCGCTCCATCAACAGCACCATTT
TTTTTTGATCTTCCAATAGTCAAAGAGGTTGGAGGATCAGATCTAGGAGTTGAAATCATGTCGTTTACAGGGACTCAACAGAAATGTAAGGCTTG
TGAAAAAACTGTTTACCCAGTTGAGCTTTTGTCAGCTGATGGGATTAGTTATCACAAATCTTGTTTCAAGTGTACTCATTGTAAAGGAACTCTCA
AGTTGAGCAGTTACTCCTCAATGGAAGGTGTTCTGTATTGCAAGCCTCATTTTGAGCAGCTCTACAAGGAGTCTGGCAACTTCAATAAGAACTTT
CAATCCCCTGTGAAGTCAGCTGAGAAGTTAACTCCAATGCTGACAAAATCTCCAAGCAAAGCTGCCGGCATGTTTTCTGGGACACAGGAAAAATG
TGCCACCTGCGGTAAAACGGCTTATCCACTTGAGAAGGTGACAGTGGAGAACCAAAGTTATCACAAGTCGTGTTTCAAGTGTTCTCATGGTGGGT
GCTCTTTAAATCCTTCGAATTATGCTGCCCTAGATGGGATATTGTACTGCAAACCTCATTTTTCACAGCTTTTCAAGGAGAAAGGCAGCTACAAT
CATTTAATCAAGTCTGCTTCAATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375901] SGN-U575402 Tomato 200607 Build 2 37 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188755 [Download][View] Facility Assigned ID: FA0AAD3BF10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0046 Quality Trim Threshold: 14.5