EST details — SGN-E376682

Search information 
Request: 376682Match: SGN-E376682
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174548Clone name: TUS-19-A10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174548 is on microarray TOM1 spot ID 1-1-7.1.15.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23205 [cLED-4-M19] Trace: SGN-T49217 EST: SGN-E231448 Direction: 5' Facility: TIGR
Clone: SGN-C174548 [TUS-19-A10] Trace: SGN-T189297 EST: SGN-E376683 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E376682Length: 686 bp (924 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E376682 [] (trimmed) AGGAGGAAGCTATCAACTTATATATTATGTAATATAAACAAAATATAATTTATTTAAACTACAACTTGTCAGACATGAAACTTAAGTTGGCAAAA
TAAAAATAGAAATATACTTAAGTAGGCATTCTGATGAGCTCAATGTCCACTTGATGGCGATGAGCGACCAAGAAATTGCATTTTCTTAAACATTT
CCTGTTGGCATGCCATTACAATGTCCATTTGAGAATTTAATGCTTGTATCTGAGATTGTTGGTCTTGCATTTGAGACTGCTGATACTCAACAATA
GTTTCAGCTGTATTTAGTCGTTTCTTTAAATTATATTGGATCGTATCAGCTTCCTCTTTTGCCTTTTTGAGAGTCTTCCAGCTCTGCAGTTCTCC
TTTGTGTAGCTATTGTAGTATTAGATTTTGGACCATAACCGAGACCTTTTATGTATCCCGATTTTGTACCAAGTACAGTATCCACGATTTCATCA
ATAGTCATAGAAGACTCTCCTGAACTATATAGATCTTTCAAATCTTTCATGTTGTTATAGTTAGTCTCAGTCTCTTGAGATGACCATTCTTTTTC
CTTAAGAGTAATAAGTATGCTTATAAAACTCGATTCTGTCAGGCTCCACTCTTTCAGGGTTTGTTTCACCCATTTCAGCACGAGCAGCTACAAAA
GCCTTTGACCCCATTAAATGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376682] SGN-U580153 Tomato 200607 Build 2 15 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189296 [Download][View] Facility Assigned ID: FA0AAD7BA05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.949 Expected Error Rate: 0.0022 Quality Trim Threshold: 14.5