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EST details — SGN-E377179

Search information 
Request: 377179Match: SGN-E377179
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174568Clone name: TUS-19-B6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174568 is on microarray TOM1 spot ID 1-1-3.2.15.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23231 [cLED-4-N20] Trace: SGN-T49543 EST: SGN-E231774 Direction: 5' Facility: TIGR
Clone: SGN-C174568 [TUS-19-B6] Trace: SGN-T189534 EST: SGN-E377180 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377179Length: 407 bp (920 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377179 [] (trimmed) AAAAAAAGCCACGTTTTATTTATTCCATTATATATATAGAAAAAGTACATGGAAACATTATAATCAACATGAACCCTAATTATTTTTAATATGGG
GGTGGTTAATTACTTCAATAATCCAATAATTTAAGTCACTTTGGGAATTTGTACAACATCACCCAAAATGTTAACAAAAAAACGAACTCGATCAC
ATTGAAAATCCTTTGTGACTGGAAAACCATTCAATAATATTGGAATATTAGCTATGGATGGATTTTCCTTTTCAATTATTCCCTTAACATATTGG
GCTGGTACACCAATAAGTTTTGGCCAAAATTGTTTTTCTTTGCACCAAAATGCGGATTCAAATTTTTTTAAAAGTTTTATGACTTTTGGTCCATC
ACTTTTTTTTTGGGCCATGAAAGTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377179] SGN-U578279 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189533 [Download][View] Facility Assigned ID: FA0AAD7DA03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.869 Expected Error Rate: 0.0187 Quality Trim Threshold: 12.5