EST details — SGN-E377467
Search information |
Request: 377467 | Match: SGN-E377467 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C175047 | Clone name: TUS-20-F5 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175047 is on microarray TOM1 spot ID 1-1-4.2.14.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C23895 [cLED-6-K13] | Trace: SGN-T49933 | EST: SGN-E232947 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E377467 | Length: 500 bp (880 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E377467 [] (trimmed)
ATGTTTCTCCCTATACCCTTCTTCTTTCAGGGACATATGTCTGCATGCTTCCATAAGAAGGGAATGCCAGAAGAAAAGAAGTCATCGTTGAGTAA
AAAAAACGCGTCTCCTGTGAAAAACTTTGTCGATGACTTAATGTTTTTTGGAGACTCTGCTCCTTCCTCCGAGGCATTTCAGGAAGTTGAGGATG
AAAGTGAAGAAAGAAGAAATGCTACGTTGAAACATTATTTGAAGACCCAAGAGCGCATGGCCAAGGCTTTGGCTGAGAAGACTCAGCGTGATCTT
CAGTCTCAGAATGAGCAGGAAGAGAAGCATAGGCTTGCTGATACGCTGAACTATGATATAAAACGTTGGGCTACTGGAAAGGAACGCAACCTCCG
AGCGTTGCTGTCGTCACTACAACATGTATTGTGGCCTGAATGCGGTTGGCAGCCAGTTTCATTGACTGATTTGATCACTTCTACATCTGTCAATA
AAAGTTTATCACAATGCACCTTTAT
AAAAAACGCGTCTCCTGTGAAAAACTTTGTCGATGACTTAATGTTTTTTGGAGACTCTGCTCCTTCCTCCGAGGCATTTCAGGAAGTTGAGGATG
AAAGTGAAGAAAGAAGAAATGCTACGTTGAAACATTATTTGAAGACCCAAGAGCGCATGGCCAAGGCTTTGGCTGAGAAGACTCAGCGTGATCTT
CAGTCTCAGAATGAGCAGGAAGAGAAGCATAGGCTTGCTGATACGCTGAACTATGATATAAAACGTTGGGCTACTGGAAAGGAACGCAACCTCCG
AGCGTTGCTGTCGTCACTACAACATGTATTGTGGCCTGAATGCGGTTGGCAGCCAGTTTCATTGACTGATTTGATCACTTCTACATCTGTCAATA
AAAGTTTATCACAATGCACCTTTAT
Unigenes |
Current Unigene builds | |||||
[SGN-E377467] | SGN-U576934 | Tomato 200607 | Build 2 | 31 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T189966 [Download][View] | Facility Assigned ID: FA0AAD8CC03RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.972 | Expected Error Rate: 0.0088 | Quality Trim Threshold: 14.5 |