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EST details — SGN-E377675

Search information 
Request: 377675Match: SGN-E377675
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174940Clone name: TUS-20-A18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174940 is on microarray TOM1 spot ID 1-1-7.1.13.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23772 [cLED-6-E9] Trace: SGN-T50209 EST: SGN-E233223 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377675Length: 646 bp (914 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E377675 [] (trimmed) CAGGTAAGTGCTTATGGGAAAGCTGGCAAAGCTGAAAAACTTGGAGCTGTTTTGCGGTTTATTGAGAATTCTGACGTGGCACTTGACACCGTGTT
TTTTAACTGTCTAGTGGATGCATATGGGATGATGGGATGCTTCACAGAGTTGAAAGGGGTGCTCGAGATGATGGAACAAAGTGGATGTAAGCCAG
ATAAGATAACATACAGAAGTATGATCAAAGCATATTCAGTAAATGGAATGACTAACAAAGCATCAGAGCTCCGAAACATACTTGCCTCGTTGGAG
AAGGCACGATAGCTTCATAGTTCAAAGACGATCGATAGCAATGAGCCAAAACGTAACTTTGTGCATCACAAGTTCGTTGGTCAGATAGCTTCTGA
GCCATTGTAAGTGGCTTCAGAAATGGTTGAAAGACATTGCTCATGATGGTCTTAACCTTTAACCGAATGCTGTCAGCAAACATCACCAACGAAAA
CGATCAGTTGGAATTGGACCGCGGTGGAGACGAGCAGTCAATGGTGTCACAAACTCTTGCTTCACAGTATCTTGAAGGTCAATTGAAGTTGCAGC
TCTTTGACAGCAATCAAAGGATTACTAAAAGTGGAAAAGCTCGAAAGATGAAAAGTTTGATTACCACTTTACCCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377675] SGN-U584678 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189886 [Download][View] Facility Assigned ID: FA0AAD8BA09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0082 Quality Trim Threshold: 14.5