EST details — SGN-E377715

Search information 
Request: 377715Match: SGN-E377715
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175170Clone name: TUS-20-K8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175170 is on microarray TOM1 spot ID 1-1-1.3.14.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24037 [cLED-7-A19] Trace: SGN-T50464 EST: SGN-E231955 Direction: 5' Facility: TIGR
Clone: SGN-C175170 [TUS-20-K8] Trace: SGN-T189927 EST: SGN-E377716 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377715Length: 562 bp (916 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377715 [] (trimmed) AGGAAAGGTAGCAATAATATTAAAAGCTTTAGTCAGAGATCAAACATACATAAATGTGTTCATGCACTATTCCAGTGCAGTGAAACAAACTCATC
TGGACCATTTTGGACTAGGTTTATATTTACACTGCAATATAACACGAGTAAACGAAAAAATAGTTGGCCAAAAAAAAGTGGTCGATTGGCCATAT
GAAGATCTACAAATATATAGGGACAAACATTTACGAAATGAAAACAGAAGACATGTATGATGAGATTGAGATTGCTACTTTGTTTCTGCAAGAAA
ATGCTCACTCATCGATATCACCATTATTAATCCTTATCTCTAAGAGTTCTTCAAATGGTTGTCGACAAATTGGGCATCGGTTTGACTGAAGTCTC
AATGTGTTTGCACATCCACTGCACATGCACATATGGCGGCATGGAAGAACTGCAGTATCTTTGGGTTCCGTCATGCATATTACACACTCCTTGCC
TGAGCCATTGTTCTCATAATCTGGGCCAGAGTTTCCAATTCCATATATCTCATGCAGCTCATAGCGAACATTATCAACCCATAAAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377715] SGN-U582147 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189926 [Download][View] Facility Assigned ID: FA0AAD8BF04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0055 Quality Trim Threshold: 14.5