EST details — SGN-E377771

Search information 
Request: 377771Match: SGN-E377771
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175525Clone name: TUS-21-J3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175525 is on microarray TOM1 spot ID 1-1-6.2.13.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15418 [cLED-11-N8] Trace: SGN-T51597 EST: SGN-E235587 Direction: 5' Facility: TIGR
Clone: SGN-C175525 [TUS-21-J3] Trace: SGN-T190534 EST: SGN-E377772 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377771Length: 671 bp (915 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377771 [] (trimmed) CGAAGAATCTAGAGTTGTTGTATATACGTTTATAATAATCTCAATACAAATATGTGGTTAACTTGATATGAACTATATACCAAACCAATAATTTC
TATTAATAATTGATCTAACCAATTACAAAAAATAGTAACTAATAATGAAAAAGTCAAAATAAACAAAACTTGTCCAAATTCTCCTAATTCTTTGG
CTGCACTTCATTTCCCAGTACATTCTACCGAAAGGTCGATTGTCGAAATTTCAACAAATTCTTTTTTATTAAAATGCACATTCTAGAGAGTCTCT
TCATTGATCTGGTGATCGATTATTAAATAGTACATTCTATTGAAAGGTCGATTGTCAAAATTTCAACAAATTTTCTTTTATTAAAATGCATATTC
TGGAGAGTCTCTTCATTGGTCTGGTGATTAATTAATCATCCAAGAGCGCAACCATCATGTTTAATGAATTGATGGAATTTAGTATAAATATTATA
GTGACGGGTGAATAACTTCTTTTTTTTTTTCAATAAAGATTCAGATAAAATCAAACTTGTCTGGTAGTGTTCGATTTCATTTTTTTTTTCATGTT
AACCTTCTTGTCTCAAGGAAACTTTTATTAGTGGAATCACAAGATTTTAAGTATTCAAGAAATGCAGCAAAATTTGTGTCTTTGTAAAGACTTGG
ATTTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377771] SGN-U576069 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190533 [Download][View] Facility Assigned ID: FA0AAD9CE02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.918 Expected Error Rate: 0.0023 Quality Trim Threshold: 14.5