EST details — SGN-E377771
Search information |
Request: 377771 | Match: SGN-E377771 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C175525 | Clone name: TUS-21-J3 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175525 is on microarray TOM1 spot ID 1-1-6.2.13.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C15418 [cLED-11-N8] | Trace: SGN-T51597 | EST: SGN-E235587 | Direction: 5' | Facility: TIGR |
Clone: SGN-C175525 [TUS-21-J3] | Trace: SGN-T190534 | EST: SGN-E377772 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E377771 | Length: 671 bp (915 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E377771 [] (trimmed)
CGAAGAATCTAGAGTTGTTGTATATACGTTTATAATAATCTCAATACAAATATGTGGTTAACTTGATATGAACTATATACCAAACCAATAATTTC
TATTAATAATTGATCTAACCAATTACAAAAAATAGTAACTAATAATGAAAAAGTCAAAATAAACAAAACTTGTCCAAATTCTCCTAATTCTTTGG
CTGCACTTCATTTCCCAGTACATTCTACCGAAAGGTCGATTGTCGAAATTTCAACAAATTCTTTTTTATTAAAATGCACATTCTAGAGAGTCTCT
TCATTGATCTGGTGATCGATTATTAAATAGTACATTCTATTGAAAGGTCGATTGTCAAAATTTCAACAAATTTTCTTTTATTAAAATGCATATTC
TGGAGAGTCTCTTCATTGGTCTGGTGATTAATTAATCATCCAAGAGCGCAACCATCATGTTTAATGAATTGATGGAATTTAGTATAAATATTATA
GTGACGGGTGAATAACTTCTTTTTTTTTTTCAATAAAGATTCAGATAAAATCAAACTTGTCTGGTAGTGTTCGATTTCATTTTTTTTTTCATGTT
AACCTTCTTGTCTCAAGGAAACTTTTATTAGTGGAATCACAAGATTTTAAGTATTCAAGAAATGCAGCAAAATTTGTGTCTTTGTAAAGACTTGG
ATTTGT
TATTAATAATTGATCTAACCAATTACAAAAAATAGTAACTAATAATGAAAAAGTCAAAATAAACAAAACTTGTCCAAATTCTCCTAATTCTTTGG
CTGCACTTCATTTCCCAGTACATTCTACCGAAAGGTCGATTGTCGAAATTTCAACAAATTCTTTTTTATTAAAATGCACATTCTAGAGAGTCTCT
TCATTGATCTGGTGATCGATTATTAAATAGTACATTCTATTGAAAGGTCGATTGTCAAAATTTCAACAAATTTTCTTTTATTAAAATGCATATTC
TGGAGAGTCTCTTCATTGGTCTGGTGATTAATTAATCATCCAAGAGCGCAACCATCATGTTTAATGAATTGATGGAATTTAGTATAAATATTATA
GTGACGGGTGAATAACTTCTTTTTTTTTTTCAATAAAGATTCAGATAAAATCAAACTTGTCTGGTAGTGTTCGATTTCATTTTTTTTTTCATGTT
AACCTTCTTGTCTCAAGGAAACTTTTATTAGTGGAATCACAAGATTTTAAGTATTCAAGAAATGCAGCAAAATTTGTGTCTTTGTAAAGACTTGG
ATTTGT
Unigenes |
Current Unigene builds | |||||
[SGN-E377771] | SGN-U576069 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T190533 [Download][View] | Facility Assigned ID: FA0AAD9CE02FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.918 | Expected Error Rate: 0.0023 | Quality Trim Threshold: 14.5 |