EST details — SGN-E378246
| Search information |
| Request: 378246 | Match: SGN-E378246 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C174155 | Clone name: TUS-18-A1 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C174155 is on microarray TOM1 spot ID 1-1-8.1.16.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C7119 [cLEC-37-N24] | Trace: SGN-T31294 | EST: SGN-E208303 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C174155 [TUS-18-A1] | Trace: SGN-T199843 | EST: SGN-E398517 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E378246 | Length: 526 bp (1392 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E378246 [] (trimmed)
TTCACGAGGAGATGGGGAGAGTGGTTTGCTTTTGTTTGAGCAGATGAGAAAACTTAGACGGTTGGAGCCCAATGGGGACACTTTTTCCGTGGTGC
TTTCAGCCTGTGCTAGTAAGGGGTATGTGAAAGAAGGTTTTACGTATTTTGAGCTAATGAAGAATGAATATGGCATTGTTCCTGGAGTTGAGCAT
TACTTAGGGATCGCTGATGTTTTGGGAAAATCTGGGCATTTGAATGAATTGCTAGAGTTTATTGAAGACATGCCTATTGAGCCTACAAAAGTAGT
ATGGGAGGCCGTGATAAATTTTGCACGAATTCATGGGGATATTGAACTTGAAGATCGAACGGAGGAGCTGCTCATTATGTTAGATTCTTCCAGAA
ATATGGCTGATAAGCCGGTTGCACCATTTCAGAAAAGGCATTCTGAGTTTAATATGCTTGAGGGTAAAGACAGAGTTAATGAGGTTCAGAGCACA
ATTCCACATAGGGCAGATGCATATGAAAAATTGGAAAGGCTTAAGCCGGGC
TTTCAGCCTGTGCTAGTAAGGGGTATGTGAAAGAAGGTTTTACGTATTTTGAGCTAATGAAGAATGAATATGGCATTGTTCCTGGAGTTGAGCAT
TACTTAGGGATCGCTGATGTTTTGGGAAAATCTGGGCATTTGAATGAATTGCTAGAGTTTATTGAAGACATGCCTATTGAGCCTACAAAAGTAGT
ATGGGAGGCCGTGATAAATTTTGCACGAATTCATGGGGATATTGAACTTGAAGATCGAACGGAGGAGCTGCTCATTATGTTAGATTCTTCCAGAA
ATATGGCTGATAAGCCGGTTGCACCATTTCAGAAAAGGCATTCTGAGTTTAATATGCTTGAGGGTAAAGACAGAGTTAATGAGGTTCAGAGCACA
ATTCCACATAGGGCAGATGCATATGAAAAATTGGAAAGGCTTAAGCCGGGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378246] | SGN-U581772 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1306 [Download] [View] | Facility Assigned ID: TUS18A1.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0035 | Quality Trim Threshold: 14.5 |
Working
