EST details — SGN-E378639
| Search information |
| Request: 378639 | Match: SGN-E378639 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C184912 | Clone name: TUS-46-A6 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C184912 is on microarray TOM1 spot ID 1-1-3.1.12.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C17333 [cLED-19-F23] | Trace: SGN-T53450 | EST: SGN-E237536 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E378639 | Length: 293 bp (1095 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E378639 [] (trimmed)
TTCATTAAGCAAGCACAACAATATTCAAAGGGTAGGCCAAGTTACCCTCAAGAATTATTCAATTTCATTGCTTCTAAAACACCTTCTCATGATCT
TGTTTGGGATGTTGGTACTGGTAGTGGCCAGGCTGCTCAATCTTTAGCTAAGCTTTACAAGAATGTGATAGCTACAGACACAAGTCCAAAGCAGC
TTGAATTTGCAGCNAAGGTTCCAATGTTCATACATATGTACCTCTCCTAAGTTGTCAAAATCCGAAATCGAAACAAAATAGGATCAGAATCAAGT
GTAGATTT
TGTTTGGGATGTTGGTACTGGTAGTGGCCAGGCTGCTCAATCTTTAGCTAAGCTTTACAAGAATGTGATAGCTACAGACACAAGTCCAAAGCAGC
TTGAATTTGCAGCNAAGGTTCCAATGTTCATACATATGTACCTCTCCTAAGTTGTCAAAATCCGAAATCGAAACAAAATAGGATCAGAATCAAGT
GTAGATTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378639] | SGN-U580752 | Tomato 200607 | Build 2 | 98 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1856 [Download] [View] | Facility Assigned ID: TUS46A6.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.957 | Expected Error Rate: 0.0148 | Quality Trim Threshold: 20.5 |
Working
