EST details — SGN-E378668
| Search information |
| Request: 378668 | Match: SGN-E378668 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C174556 | Clone name: TUS-19-A18 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C174556 is on microarray TOM1 spot ID 1-1-7.1.15.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C23215 [cLED-4-M6] | Trace: SGN-T49265 | EST: SGN-E231496 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C174556 [TUS-19-A18] | Trace: SGN-T189298 | EST: SGN-E376684 | Direction: 3' | Facility: INRA |
| Clone: SGN-C174556 [TUS-19-A18] | Trace: SGN-T189299 | EST: SGN-E376685 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E378668 | Length: 812 bp (1134 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E378668 [] (trimmed)
CTTGTTTAGGATGTTGGTACTGGTAGTGGCCAGGTCGCTCAATCTTTAGCTAAGCTTTACAAGAATGTGATAGCTACAGACACAAGTCCAAAGCA
GCTTGAATTTGCAGCAAAGGTTCCAAATGTTCAATACATATGTACCTCTCCTAAGTTGTCAAAATCCGAAATCGAAACAAAAATAGGATCAGAAT
CAAGTGTAGATTTAGTAACAATTGCACAAGCAATGCATTGGTTTGATCTACCAACTTTTTATGAACATGTTAAATGGTTACTCAAGAAACCAAAT
GGTGTTATAGCATCATGGTGTTACACTACACCTAAAATAAACAACTCAGTAGATGCAATATTTGATAAATTTTACACAAGTGATGCTGGACCTTA
TTGGGAATCACCAAGAAAATTGGTCGATGAAAAGTATGAAACTATTGATTTTCCATTTGAGGCTATAGATGGATGTGATCATAATGGACCATTTG
AGTTCAAGATTGAGAAAGTTATGGACTTGGATTCTTGTTTTACATACTTGAAGTCATGGTCAGCTTATCAAACTGCAAAAGAAAAGGGTGTTGAG
TTGTTAAGTGAAGATGTTGTTGAAAAATTTACAAGTGCTTGGAATGAAGATGGGAAGAGTGAGAAAAAAGTGATTTATCCTATTTACTTGAGGAT
TGGAAAAGTTGGAAATTTGGATTGAAAGTGTAAAGCAAATACAATTAGTTATGTGCACTTGATCATCTATTTATTTTGTATGTTATTTCTCTTAG
TTGTTATTGTTATGTATCTTTTAATAATATAAAGTATCTAAGTACTAATTAT
GCTTGAATTTGCAGCAAAGGTTCCAAATGTTCAATACATATGTACCTCTCCTAAGTTGTCAAAATCCGAAATCGAAACAAAAATAGGATCAGAAT
CAAGTGTAGATTTAGTAACAATTGCACAAGCAATGCATTGGTTTGATCTACCAACTTTTTATGAACATGTTAAATGGTTACTCAAGAAACCAAAT
GGTGTTATAGCATCATGGTGTTACACTACACCTAAAATAAACAACTCAGTAGATGCAATATTTGATAAATTTTACACAAGTGATGCTGGACCTTA
TTGGGAATCACCAAGAAAATTGGTCGATGAAAAGTATGAAACTATTGATTTTCCATTTGAGGCTATAGATGGATGTGATCATAATGGACCATTTG
AGTTCAAGATTGAGAAAGTTATGGACTTGGATTCTTGTTTTACATACTTGAAGTCATGGTCAGCTTATCAAACTGCAAAAGAAAAGGGTGTTGAG
TTGTTAAGTGAAGATGTTGTTGAAAAATTTACAAGTGCTTGGAATGAAGATGGGAAGAGTGAGAAAAAAGTGATTTATCCTATTTACTTGAGGAT
TGGAAAAGTTGGAAATTTGGATTGAAAGTGTAAAGCAAATACAATTAGTTATGTGCACTTGATCATCTATTTATTTTGTATGTTATTTCTCTTAG
TTGTTATTGTTATGTATCTTTTAATAATATAAAGTATCTAAGTACTAATTAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378668] | SGN-U580752 | Tomato 200607 | Build 2 | 98 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1317 [Download] [View] | Facility Assigned ID: TUS19A18.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.936 | Expected Error Rate: 0.0031 | Quality Trim Threshold: 12.5 |
Working
