Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E378702

Search information 
Request: 378702Match: SGN-E378702
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179843Clone name: TUS-32-N1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179843 is on microarray TOM1 spot ID 1-1- [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C86724 [cLET-44-B12] Trace: SGN-T111353 EST: SGN-E298717 Direction: 5' Facility: TIGR
Clone: SGN-C179843 [TUS-32-N1] Trace: SGN-T186092 EST: SGN-E372939 Direction: 3' Facility: INRA
Clone: SGN-C179843 [TUS-32-N1] Trace: SGN-T186093 EST: SGN-E372940 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence Id: SGN-E378702Length: 598 bp (1156 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
[BLAST]  [AA Translate]
Current Unigene builds
[SGN-E378702] SGN-U582211 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
SGN-ID: SGN-T1561 [Download] [View] Facility Assigned ID: TUS32N1.ab1
Submitter: Koni Sequencing Facility: Giov. Lab
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0150 Quality Trim Threshold: 12.5