EST details — SGN-E378724
| Search information |
| Request: 378724 | Match: SGN-E378724 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C183867 | Clone name: TUS-43-E17 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C183867 is on microarray TOM1 spot ID 1-1-8.1.18.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C10723 [cLEC-6-B18] | Trace: SGN-T24205 | EST: SGN-E202544 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C183867 [TUS-43-E17] | Trace: SGN-T196224 | EST: SGN-E394898 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183867 [TUS-43-E17] | Trace: SGN-T196225 | EST: SGN-E394899 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E378724 | Length: 421 bp (1184 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E378724 [] (trimmed)
GAAAAAGTGTCACCTGGGTTGGGGTCCTAATAAAATTCCAAGACTTGGTAATACCTCTACTAATAATAAACCTGCTGATCAAGCTACTGAGGCTA
CTATGAGAAAGGCTCGGGTCTCGGTCAGGGCTCGATCAGAAGCTCCCATGATCACAGATGGCTGTCAATGGCGAAAGTATGGGCAGAAAATGGCT
AAGGGAAACCCGTGCCCTCGAGCTTATTACCGGTGCACCATGGCAGCTGGTTGTCCAGTTCGGAAGCAAGTTCAAAGATGTGCAGAGGACAGAAC
AATCTTGATCANCACTTATGAAGGTACTCACAACCATCCGTTGCCTCCGGCAGCCATAGCGATGGCCTCGACAACTTTCTCAGCAGCGAAAATGT
TGCTCTCGGGGCTCTATGCCAAGTGCAGATGGGGCTAATGA
CTATGAGAAAGGCTCGGGTCTCGGTCAGGGCTCGATCAGAAGCTCCCATGATCACAGATGGCTGTCAATGGCGAAAGTATGGGCAGAAAATGGCT
AAGGGAAACCCGTGCCCTCGAGCTTATTACCGGTGCACCATGGCAGCTGGTTGTCCAGTTCGGAAGCAAGTTCAAAGATGTGCAGAGGACAGAAC
AATCTTGATCANCACTTATGAAGGTACTCACAACCATCCGTTGCCTCCGGCAGCCATAGCGATGGCCTCGACAACTTTCTCAGCAGCGAAAATGT
TGCTCTCGGGGCTCTATGCCAAGTGCAGATGGGGCTAATGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378724] | SGN-U576773 | Tomato 200607 | Build 2 | 24 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1784 [Download] [View] | Facility Assigned ID: TUS43E17.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.997 | Expected Error Rate: 0.0162 | Quality Trim Threshold: 14.5 |
Working
