EST details — SGN-E378764
| Search information |
| Request: 378764 | Match: SGN-E378764 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C178379 | Clone name: TUS-29-A1 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C178379 is on microarray TOM1 spot ID 1-1-8.1.4.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C65272 [cLEM-8-N14] | Trace: SGN-T85631 | EST: SGN-E272080 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C178379 [TUS-29-A1] | Trace: SGN-T183747 | EST: SGN-E370406 | Direction: 5' | Facility: INRA |
| Clone: SGN-C178379 [TUS-29-A1] | Trace: SGN-T183812 | EST: SGN-E370471 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E378764 | Length: 443 bp (1176 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E378764 [] (trimmed)
TTCACGAGGAGCAAAAGAGCCAAGTGTTTCAACAATGTTGATGAACTTCAGTAATGATTTTGATCCTTATGGTGCCTTAAGTACCCCCTTGTATC
AAACATCTACTTTTAAGCAACCTTCAGCGACCGAAAATGGGCAATATGATTATACACGGAGTGGAAATCCAACAAGGGATGCGTTGGAAAAGCTT
CTTGCAGAGCTTGAGAAAGCAGATCGAGCATTTTGCTTTACCAGTGGAATGGCCGCCTTGGCAGCTGTAACTCGTCTCGTCAAAGCTGGTGAGGA
GATTGTTGCCGGGGATGACATATATGGTGGTTCTGATCGGCTGCTCTCACAAGTTGTTCCAAAAGCCGGGATCGTGGTCAAGCGAGTGGATACCA
CTAATTTAGATGAGGTTGCTTCTGTGATTAACCACGNACAAAGCTTGTTTGGCTGAAAAGCCA
AAACATCTACTTTTAAGCAACCTTCAGCGACCGAAAATGGGCAATATGATTATACACGGAGTGGAAATCCAACAAGGGATGCGTTGGAAAAGCTT
CTTGCAGAGCTTGAGAAAGCAGATCGAGCATTTTGCTTTACCAGTGGAATGGCCGCCTTGGCAGCTGTAACTCGTCTCGTCAAAGCTGGTGAGGA
GATTGTTGCCGGGGATGACATATATGGTGGTTCTGATCGGCTGCTCTCACAAGTTGTTCCAAAAGCCGGGATCGTGGTCAAGCGAGTGGATACCA
CTAATTTAGATGAGGTTGCTTCTGTGATTAACCACGNACAAAGCTTGTTTGGCTGAAAAGCCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378764] | SGN-U584762 | Tomato 200607 | Build 2 | 19 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1483 [Download] [View] | Facility Assigned ID: TUS29A1.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.997 | Expected Error Rate: 0.0208 | Quality Trim Threshold: 14.5 |
Working
