EST details — SGN-E378823

Search information 
Request: 378823Match: SGN-E378823
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C167993Clone name: TUS-1-P7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C167993 [TUS-1-P7] Trace: SGN-T555 EST: SGN-E379650 Direction: 3' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E378823Length: 674 bp (802 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E378823 [] (trimmed) TCCCACCAGGTTGGTATTACTATCCCCAAAGCAAATGTCACAGTCAACTTCCATACCCAGGAACCAACAGCGTATTCGCGACCACGGCTACGATG
ATTACATGGAAGTGGAGAAGAAAATTCGTAAAGTAAAGAAATTCCAAGAACTACTTCTTACTCAACCTAATTCAATGATCGCCATTTCTCGCCTT
GATATGCTTGCTCGCCGTTTTGGGTTCAAACAATATGAAGCAGGGAAGTTTATTCTCAAATTTCCTCATGTTTTTGAGGTATTCGAACACCCAGT
TCAGAGAATATTATATTGTAGGCTTACTCGTAAATCATTGCTTCAAATTGAGCAAGAAAAACTAGCACTTTTAGCTCAATTGCCTTTAGCTGTAA
CCCGTTTACGGAAGCTTCTGTTGCTATCGAATACGGGTAGGTTAAGGTTAGAACATGTTAGGATTGCAAGGAAAGATTTTGGTTTACCTGATGAT
TTTGAGTTTTCTGTGGTTTTGAAGTATCCCAAGTATTTTAGATTGTTTGATGCTAAAGAGACTAGGAATAAGTATATTGAGGTTGTTGAAAGAGA
CCCGCGATTAACTGTTTGTGCTGTGGAGAATGTTAGGGAGAGAGAGTATAGAGAAAAGGGTGGCGAAGAAGAGAATGTGCGGTTTTCATTTAGAG
TGAATTTCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378823] SGN-U583740 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T81 [Download] [View] Facility Assigned ID: 222_H07_TUS01P7.T3_045.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0033 Quality Trim Threshold: 14.5