EST details — SGN-E378870
| Search information |
| Request: 378870 | Match: SGN-E378870 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C168415 | Clone name: TUS-3-A21 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C168415 [TUS-3-A21] | Trace: SGN-T329 | EST: SGN-E379185 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E378870 | Length: 753 bp (801 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E378870 [] (trimmed)
TTCCCCGAGACATAATATTTTTTTTCCAAAGTGGAATAAAGAAAAATAATTAACATTAAATAGGAGTTACCACTCATTTATTGGACTACTAGCTG
CATGTGGACCCACTTATTGTACTGCACACTTATCCTTTATCTTATAGATTTACGTTCACAGCACGATAATATAATTCGTGAAAAAGAATAGTGTG
TATGTAGATTTATACGTTTCGTTTATGAAACGTTTTAAATCCTACTGTAAGTTACTTTCCAACGGAATTCATCTGCTTCTTCATCTCTAACGAAA
GTATAGGCCTTTAAATTTCCATCAATTTCAAGTCTAAGATATGTCAATGTTGTGTTGTATTTAGTAAATGCCATCACATGTGAACTTCTTTGTGT
TGATTTTGCAAATCTATAATCCAATTTCAATCTTTGATTCCCACTATTTAATTTTATCGATTCCAATGTGTTATTTCCATAATCGAACCAAGCTA
ATTCCACGTCAACCTTGTTTCCCTTGTAGACTGCAAACAATCTCGGCTGCACCACCAAGCTATAAGGCCCGTTCGCATTCTTTTTCACCGAGGCC
CGGCTCACAAGCTTATTCGGGCCGGACAATCTGAGAGTTTGGCCCACTAGTAAAGTGTCAGTGGGATAGTTGAAACTCTGCCAGACGAATTTACC
TTTTTTGTCATGTAGCACCATGTTACCGTTAGGTAACAAACTTGACCCTGTCACCCCCTTATTGGCCGTGTTGCTCTGCCAAGCGATT
CATGTGGACCCACTTATTGTACTGCACACTTATCCTTTATCTTATAGATTTACGTTCACAGCACGATAATATAATTCGTGAAAAAGAATAGTGTG
TATGTAGATTTATACGTTTCGTTTATGAAACGTTTTAAATCCTACTGTAAGTTACTTTCCAACGGAATTCATCTGCTTCTTCATCTCTAACGAAA
GTATAGGCCTTTAAATTTCCATCAATTTCAAGTCTAAGATATGTCAATGTTGTGTTGTATTTAGTAAATGCCATCACATGTGAACTTCTTTGTGT
TGATTTTGCAAATCTATAATCCAATTTCAATCTTTGATTCCCACTATTTAATTTTATCGATTCCAATGTGTTATTTCCATAATCGAACCAAGCTA
ATTCCACGTCAACCTTGTTTCCCTTGTAGACTGCAAACAATCTCGGCTGCACCACCAAGCTATAAGGCCCGTTCGCATTCTTTTTCACCGAGGCC
CGGCTCACAAGCTTATTCGGGCCGGACAATCTGAGAGTTTGGCCCACTAGTAAAGTGTCAGTGGGATAGTTGAAACTCTGCCAGACGAATTTACC
TTTTTTGTCATGTAGCACCATGTTACCGTTAGGTAACAAACTTGACCCTGTCACCCCCTTATTGGCCGTGTTGCTCTGCCAAGCGATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378870] | SGN-U569601 | Tomato 200607 | Build 2 | 89 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T873 [Download] [View] | Facility Assigned ID: 239_A09_TUS03A21.Td_066.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0102 | Quality Trim Threshold: 20.5 |
Working
