EST details — SGN-E378891

Search information 
Request: 378891Match: SGN-E378891
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C168005Clone name: TUS-1-P19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C168005 [TUS-1-P19] Trace: SGN-T719 EST: SGN-E379550 Direction: 3' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E378891Length: 703 bp (808 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E378891 [] (trimmed) AAATTTCTTTCCTTTGCTTTTATAACATTAATAAGAAAAATTAATTAATTACACATAACATAACATTGCAGCAGTTTTGGCTTAAGGACAAATTC
TCTTCCTTTTCCTCTTTGCTTTCAGGTCGGTTTTGCGCAGATAGATCATTGCCAGGGGAGGTTGGTGCCCCTTGAGAAATGGATTTTGTGGAGTT
GAAGAGACGGAGCAGCACTTCTAGGAGACTGCTCTTGCTTGCTGGCATTGCTGCGATTTGTTTATTTATATTCAGAAATTCATCGAGTTTTAGTA
CCTCTGTCAAGTTCTCTCAACACGAACCAGGTGTAACTCATGTGTTAGTGACGGGAGGTGCTGGCTTCATTGGTTCTCATGCGTCCCTTCGTCTC
CTAAAGGATTCGTATCGTGTAACTATAGTGGACAATCTTTCCCGTGGAAATATGGGCTCGGTAAAAGTTCTCCAGGAACTTTTCCCAGAACCAGG
GCGACTTCAGTTTATTTATGCTGATTTGGGAGATGCTGCTGCTGTTAACAAAATCTTTTCACAAAATGCATTTGATGCTGTGATGCATTTTGCAG
CTGTTGCATATGTTGGTGAAAGTACTCAAGAACCGCTTAGGTATTATCATGACATAACATCACATACTCTGCTTCTAGTTAAGGCAATGGCAGCA
CACGGTGTAAAAACCTAATCTATTCNAGTACTTGTGCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378891] SGN-U573008 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T1100 [Download] [View] Facility Assigned ID: 242_B06_TUS01P19.T3_047.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0096 Quality Trim Threshold: 14.5