EST details — SGN-E378897

Search information 
Request: 378897Match: SGN-E378897
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C167752Clone name: TUS-1-F6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C167752 [TUS-1-F6] Trace: SGN-T215 EST: SGN-E380002 Direction: 3' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E378897Length: 534 bp (808 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E378897 [] (trimmed) AAAAGTTTTATCGTGTTATCTAGATTAAATTCTAGTGTGATGACTTGATTTAACCTTTGATTTATCTTTAGTGATTTAACAGAGATACATCAGTT
GCATTCACCAAGAAACAGTGCAAAAAGAAGTGTTATTTTTCACAAGTATCATCATTTTGAGGACAGAAATAATGGTCCTAAAGCTAATCCTGGAC
CTAATTGCCTTTTGTAGAGGACCCACAAATCAAAATCTTTAGGATTTGCCAATATCTTTTGATGGCTTCACTTCACTGCAAGTGCTTGGTTTTTT
GTCTGCCCACAAGGATGATGGTCCCTCAACGGCTGAACGTAGTCTTGTGGTACTCATCTCTGAGAATACTTTTCTACATATCACATATGTGGTTG
CAATGTCTTCAATCAAGAAAGGAAATGACTTCACTCATGTTCCGTAGTTTGATTGGGACATCTTCACTTGAAAAATGTTACTCAAGGTACTTTCT
ATCCTGGTGGTAGCCAGTGTGAGAAGTGTTCCCCTCGTATNCATTAGGTGAACTTCATA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378897] SGN-U565427 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T1157 [Download] [View] Facility Assigned ID: 243_F06_TUS01F6.T3_057.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0128 Quality Trim Threshold: 14.5