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EST details — SGN-E378923

Search information 
Request: 378923Match: SGN-E378923
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C167703Clone name: TUS-1-D5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C923 [cLEC-10-B21] Trace: SGN-T24731 EST: SGN-E201144 Direction: 5' Facility: TIGR
Clone: SGN-C167703 [TUS-1-D5] Trace: SGN-T1139 EST: SGN-E379687 Direction: 5' Facility: Avesthagen
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E378923Length: 777 bp (796 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E378923 [] (trimmed) GGATGACGATTTTTTATTCCATATAATAACTATGAGGAGTCACATATTGCTTTATTTCTAACAAGCTATCATGATCAGAGTTTGATAAAATATAT
ACACTACTATTTACATATTAATTTTGGAATGACATTGCAACGTCAACAGAATTTACTCAGTAAATTGAGCTTACTGATTCAGTAGACAGATGTGA
GTCTAACTGGAACAACCTTCTCTCTAGCTGTATCACTGAATCCACCAGCCACAATTCTCACCACTTTCTTAAACGCAAAATGCAAGCAATTCGAC
AACGCAGCCCAACACATCAACTCATAGACAAAATCAAAAGCCGGATCAGAAAACGAGTTCGACGAAGATTCTTCCCAATTTGCCCCTCCAAATCC
ATCAAAATTCCATCCTCTACCACCACCACCACCACCGCCCCAGCTACTACCACCACCAAACGGCCCGTCATAATTACCTCCATCAAATAAAAATC
CGTTTTCATCACCTTCATCAGCTCCACCGATCAACGACTTCCGTATAATCCGCCTTGTCTTACGAGCCAGTCTTCGAGGTGCGGCTTTGACCTTA
TTGTACTTTACAGGAGGCGGCGCTAAGGCATCGATCGGACAAATCACAGCGGAAATTTGACGAACTCCGGCGGTGGAAGGTGATTGCTGCTCCGA
TGAGGAATCGGAGATTGAGAAAAGTTGTTTGATGAGAAATTGAGATTGCGATTCAGCAGAAACTTTTGAACACCTAAGCCTTGAGTGGTTACCAC
CGCCGTTAGCGTATCGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378923] SGN-U567501 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197 [Download] [View] Facility Assigned ID: 227_D05_TUS01D5.Td_044.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0057 Quality Trim Threshold: 20.5