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EST details — SGN-E378929

Search information 
Request: 378929Match: SGN-E378929
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C168476Clone name: TUS-3-D10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C168476 [TUS-3-D10] Trace: SGN-T825 EST: SGN-E379409 Direction: 3' Facility: Avesthagen
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E378929Length: 774 bp (818 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E378929 [] (trimmed) CTATAGTGGAGAACCCGGGCTGCAGGAATTCTCCACGAGCAGCAACAACACCCTCCACATTTTGGAGAGTTTCCAAGGGGTCCACAACCTCTGCC
AGGTCCACCACCCATGATGCGGCAGCCATCTGCATCCTCCACTACTCTTAACTCTCAGCTACCTGGACCTCCTCCTCATCCTTCTTATGACGCTC
ATGCTGACAGTTTTGCTGCAAAGAGAATGAGAAAAATTGGCCAGAGAAGAGCAGTTGACTACACCAGTACAGTTGTAAGATATATGCAGATCCGC
ATGTGGCAGCGCGATTCAAGGGATAGGACAGTGTTACAACCGAGCCCAGCAGCAGCAGTTGATATATTGCCAGCAGTTGCCTATTTGGATAATCC
ATCTACAAGTTTTGCTGCTAAATTTGTTCATACATCTCTAAATAAAAACCGTTGTTCAATCAATTGTCTTGCGTGGACTCCTAGTGGGCGGCGCC
TTGTTACTGGATCTCAAAGTGGTGAATTCACACTATGGAATGGGCAATCATTTAACTTTGAAATGATTCTTCAGGCTCATGATCAAGCAGTCAGG
TCAATGGTATGGAGCCACAATGATAACTGGATGGTCACTGGTGATGACGGGGGCACAATAAAGTATTGGCAAAACAATATGAATAATGTCAAAGC
CCATAAGAATGCACATAAAGAATCAATACGGGAATTGAGCTTCTGTAGTACAGATTTAAAATTCTGCTCCTGCTCTGACGACACTACCGTTAAAA
TATGGGACTTCGCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378929] SGN-U576241 Tomato 200607 Build 2 13 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T281 [Download] [View] Facility Assigned ID: 228_D10_TUS03D10.T3_080.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.981 Expected Error Rate: 0.0030 Quality Trim Threshold: 14.5