EST details — SGN-E378931
| Search information |
| Request: 378931 | Match: SGN-E378931 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C168526 | Clone name: TUS-3-F12 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C168526 [TUS-3-F12] | Trace: SGN-T848 | EST: SGN-E379411 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E378931 | Length: 725 bp (809 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E378931 [] (trimmed)
AAATATGTATTCTCGAAATTAAAGTGCTTACTTATTAGTTGAGGTCAAGTTTAACTGTCTTGTTTTGTATTATGTCAATCTAAAATATTGTGGTG
TTTCCGAATAAATTTGCAAGACACAACACAAGGTTGAAATGAACAAAAGAGATGGAAAGTTTGGTGCAAGGCCAACAACAGCACCACCTATTCAA
CACATGTCTCGTTTGGATCAGCCTCTTCCTCCAACCATTGCATATGCACCCCAATCATATCCACCCCCACCCCCACCCCAGCAACCCTATGGATA
CCCACCACCACCACAACAACCCCCTATATACCCTCCACCCAATTATGCACCAAGTGGTGTTGGATATCCTCCACCTGGTTATCCGCGCTGAAATT
CGTAAGGCATAATATATAAACGCGTCATTTTACATGGTTTACTTAGTTATACACAGTGATTTTTTTTCAATTTCATTCTTTCTTTTTGTGGAACC
TTAGTTGTTGCATTGTAATCCCAAGTGAGGAAATAAAATTTGTCAAATTTTATTATGGCTACCTCTTATAACATGTATTTGTATTATTATTAATC
TATGAGGTAGCAGGGCAGAATTAGAGTCCAGATACGAGTACGATCGAATTTAATAATATTTACTTAAATAATATATTTTAATTATAGATTTAAGC
CTAACCCTTGCTAGGAAGGTTACGTGACCATCTGAAAATCAACTCGAAAATGTTGGAATC
TTTCCGAATAAATTTGCAAGACACAACACAAGGTTGAAATGAACAAAAGAGATGGAAAGTTTGGTGCAAGGCCAACAACAGCACCACCTATTCAA
CACATGTCTCGTTTGGATCAGCCTCTTCCTCCAACCATTGCATATGCACCCCAATCATATCCACCCCCACCCCCACCCCAGCAACCCTATGGATA
CCCACCACCACCACAACAACCCCCTATATACCCTCCACCCAATTATGCACCAAGTGGTGTTGGATATCCTCCACCTGGTTATCCGCGCTGAAATT
CGTAAGGCATAATATATAAACGCGTCATTTTACATGGTTTACTTAGTTATACACAGTGATTTTTTTTCAATTTCATTCTTTCTTTTTGTGGAACC
TTAGTTGTTGCATTGTAATCCCAAGTGAGGAAATAAAATTTGTCAAATTTTATTATGGCTACCTCTTATAACATGTATTTGTATTATTATTAATC
TATGAGGTAGCAGGGCAGAATTAGAGTCCAGATACGAGTACGATCGAATTTAATAATATTTACTTAAATAATATATTTTAATTATAGATTTAAGC
CTAACCCTTGCTAGGAAGGTTACGTGACCATCTGAAAATCAACTCGAAAATGTTGGAATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378931] | SGN-U574164 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T304 [Download] [View] | Facility Assigned ID: 228_F12_TUS03F12.T3_101.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0046 | Quality Trim Threshold: 14.5 |
Working
