EST details — SGN-E378944
| Search information |
| Request: 378944 | Match: SGN-E378944 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C167873 | Clone name: TUS-1-K7 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C9313 [cLEC-5-G6] | Trace: SGN-T23725 | EST: SGN-E200890 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C167873 [TUS-1-K7] | Trace: SGN-T31 | EST: SGN-E379469 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E378944 | Length: 793 bp (814 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E378944 [] (trimmed)
TTTCGATTTATCACAGATACAATAATATGTTTTACGAATATAAAAAGTTTTTCATGTCTTCCCATATAATGTTGTTTCAGAATCTAAAGGAGACC
ACTCTCCTCTCTCTGAATAATACAGAATAAACAGGGTATACTTGTAAAAGAAACTTTCATGCAGATACCAAGAAAGAAGGGACAGACACCATGCC
ATCACTTGGGTGGATGAGCTTGCGGTCTTGTTGGACAGGCAGCAGCCATGGTACGTAACCGTCTGGCAATTTCAGTGAAAGATGGGCGGATGGCA
GGATCTGGAGCCCAACACTGTTCCATGAGCATTCTCCACTCAGTGTCACAGAAGCTTGGCACAGGCGGTCTCAATGTGTTGTTGACAATACCACC
TATAATTGCTCCATAATGCATATTTGCATAAGGTTCTTCGCCAGTGAGGATTTCCCAGAGCACAATCCCAAAGGAAAAGACGTCGACCTTCTCGG
AAACCTTATTACTTCCACCATTCAATAGCTCTGGAGCCATCCATGGAAGCGTTCCCCTGACACCACCAGTAACCAAGGTATTTCTCTTGATTTTT
GACAGCCCAAAATCAGCCACCTTACAAATGGGTCGAGAAGGATCCTTTAAGTTGACAAGCAAATTGTCACATTTCAGAATCAAATGCACAATATT
CTTCGAGTGCAAATATTCCATTCCAAATGCNAGCATCCATTGCATTATGAGCCTCTTGCGACGATCAAGGTGTCTGTCCTTGNCAAGTAAACATG
CCTAAGAGACCATTCACCATGAACTCTGCTACT
ACTCTCCTCTCTCTGAATAATACAGAATAAACAGGGTATACTTGTAAAAGAAACTTTCATGCAGATACCAAGAAAGAAGGGACAGACACCATGCC
ATCACTTGGGTGGATGAGCTTGCGGTCTTGTTGGACAGGCAGCAGCCATGGTACGTAACCGTCTGGCAATTTCAGTGAAAGATGGGCGGATGGCA
GGATCTGGAGCCCAACACTGTTCCATGAGCATTCTCCACTCAGTGTCACAGAAGCTTGGCACAGGCGGTCTCAATGTGTTGTTGACAATACCACC
TATAATTGCTCCATAATGCATATTTGCATAAGGTTCTTCGCCAGTGAGGATTTCCCAGAGCACAATCCCAAAGGAAAAGACGTCGACCTTCTCGG
AAACCTTATTACTTCCACCATTCAATAGCTCTGGAGCCATCCATGGAAGCGTTCCCCTGACACCACCAGTAACCAAGGTATTTCTCTTGATTTTT
GACAGCCCAAAATCAGCCACCTTACAAATGGGTCGAGAAGGATCCTTTAAGTTGACAAGCAAATTGTCACATTTCAGAATCAAATGCACAATATT
CTTCGAGTGCAAATATTCCATTCCAAATGCNAGCATCCATTGCATTATGAGCCTCTTGCGACGATCAAGGTGTCTGTCCTTGNCAAGTAAACATG
CCTAAGAGACCATTCACCATGAACTCTGCTACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378944] | SGN-U577536 | Tomato 200607 | Build 2 | 26 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T505 [Download] [View] | Facility Assigned ID: 231_C07_TUS01K7.Td_049.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.983 | Expected Error Rate: 0.0108 | Quality Trim Threshold: 20.5 |
Working
