EST details — SGN-E378963
| Search information |
| Request: 378963 | Match: SGN-E378963 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C168748 | Clone name: TUS-3-O18 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C168748 [TUS-3-O18] | Trace: SGN-T1085 | EST: SGN-E379443 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E378963 | Length: 661 bp (801 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E378963 [] (trimmed)
CTTTCTCGTCTCCCTTTCTCAAATAATCTTCAAATTGTTACTGGTATCAATCTCTGTTGTGGAAGATCGATAATCCATCTCCGATTTGGGGATGA
AAGAGTCAATCAATAGCAGTACCAGTTGCGGCGATGAAGCTGCTTGGGAAATTAGACCGAGCGGCATGCTTGTTCAGAAGAGAGAAAACGATGCT
GCCGCTAATCCCACTATAATCATCAAGGTCTCGTATGCTTCTCAAGAATTTGACCTTCCTGTGCCACCTGAACTCACTTTTGGTGAAGTAAAAAG
TATCCTTTCCTCAATAATCGGTTTGGAGCCTAAGCTGCAAAAACTTCTATTCCGGGGAAAAGAAAAAGAAGATCATGAATATCTGCACTTGGTTG
GTGTGAAAGACAATTCCAAAGTGTTAGTTATGGAGGAAGAAATGGTTGAGGAAAAAATTCCTGAAGAGGTTAGGGTTACCACTGAAATATCAAGA
GGAGCCGAAGCTGTTGCTGAAGTGAGAACAGAAGTGGATAAGCTCTCAGAGCAGGTCTCTGCTGTACAAGCAGTCGTGTTTGGTGGTACTAATGT
TGAGGACAAGGATATTATCCATTTGACAGAAATGCTGATGAGACAGCTACTGAAATTGGACGGCATTGAGGCTGCAGGAGAAGGAAGAGTA
AAGAGTCAATCAATAGCAGTACCAGTTGCGGCGATGAAGCTGCTTGGGAAATTAGACCGAGCGGCATGCTTGTTCAGAAGAGAGAAAACGATGCT
GCCGCTAATCCCACTATAATCATCAAGGTCTCGTATGCTTCTCAAGAATTTGACCTTCCTGTGCCACCTGAACTCACTTTTGGTGAAGTAAAAAG
TATCCTTTCCTCAATAATCGGTTTGGAGCCTAAGCTGCAAAAACTTCTATTCCGGGGAAAAGAAAAAGAAGATCATGAATATCTGCACTTGGTTG
GTGTGAAAGACAATTCCAAAGTGTTAGTTATGGAGGAAGAAATGGTTGAGGAAAAAATTCCTGAAGAGGTTAGGGTTACCACTGAAATATCAAGA
GGAGCCGAAGCTGTTGCTGAAGTGAGAACAGAAGTGGATAAGCTCTCAGAGCAGGTCTCTGCTGTACAAGCAGTCGTGTTTGGTGGTACTAATGT
TGAGGACAAGGATATTATCCATTTGACAGAAATGCTGATGAGACAGCTACTGAAATTGGACGGCATTGAGGCTGCAGGAGAAGGAAGAGTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378963] | SGN-U571425 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T775 [Download] [View] | Facility Assigned ID: 234_G06_TUS03O18.T3_040.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0074 | Quality Trim Threshold: 14.5 |
Working
