EST details — SGN-E379040
| Search information |
| Request: 379040 | Match: SGN-E379040 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C167955 | Clone name: TUS-1-N17 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C167955 [TUS-1-N17] | Trace: SGN-T137 | EST: SGN-E379915 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E379040 | Length: 795 bp (804 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E379040 [] (trimmed)
TTCATCATAATGAACTAAAGTACTATGACTGACTTTCTGAAAACTAAAGTAATCGAGTTAACTCATGATGTGAAATCTTTCCAAAAACATTCTTA
CATTACAGAAATATTGAAATTGATTCATTTTTCTTAACCTTGATTAACACATCCTGAGTGATACAAACATATAAGCAAATCCAGGTGACTGAGGG
GCAAAAGCGAAATAAAAGTAGAGTATTAGGACTATAGCTAGAGTTTATTTAGCTAAAGTATTTGGATAAAGAAACTCTATTTCGATGGAACCATA
GTATAGTAGATGCTGAATCAAACAGAGTAAAGTTTTGATGAAAGCCTTGGCTGAATCACAGCAGAAAGTGGAAACTTTTTGGGTGTTGAGAGCCC
AAAGATTTCTTCCATGTTGAGTTCCTCAGGAGTCATATTATCAGGCAATGACCAGTTAAATCCATGAAGAAGATTAGCTAAACTAGCTTGAATCA
CCTTAAGACCCAAGCTGTATCCAGGGCACATCCTTCTCCCAGCTCCGAATGGCAAAAGCTCAAAATCGTGTCCTTTAACATCGATGGACTTCTCC
AGGAACCTGTCAGGCTTGAAAGCCTCAGGCTCGTCCCACAATGTTGGATCCCTTCCTATAGTCCACACACTCACCAGGACCCTGGTTCCTTTTTT
AACATCGTAGCCAGCTACCTTGCAGTCTTCCCGACACTCACGTGGCACCAACATTGGTGCCACGGGGTGCAGACGCATAGTCTCTTTTGCAATTG
CCTCTATGTAAGGAAGATTCGGGATGTCTTTTTCT
CATTACAGAAATATTGAAATTGATTCATTTTTCTTAACCTTGATTAACACATCCTGAGTGATACAAACATATAAGCAAATCCAGGTGACTGAGGG
GCAAAAGCGAAATAAAAGTAGAGTATTAGGACTATAGCTAGAGTTTATTTAGCTAAAGTATTTGGATAAAGAAACTCTATTTCGATGGAACCATA
GTATAGTAGATGCTGAATCAAACAGAGTAAAGTTTTGATGAAAGCCTTGGCTGAATCACAGCAGAAAGTGGAAACTTTTTGGGTGTTGAGAGCCC
AAAGATTTCTTCCATGTTGAGTTCCTCAGGAGTCATATTATCAGGCAATGACCAGTTAAATCCATGAAGAAGATTAGCTAAACTAGCTTGAATCA
CCTTAAGACCCAAGCTGTATCCAGGGCACATCCTTCTCCCAGCTCCGAATGGCAAAAGCTCAAAATCGTGTCCTTTAACATCGATGGACTTCTCC
AGGAACCTGTCAGGCTTGAAAGCCTCAGGCTCGTCCCACAATGTTGGATCCCTTCCTATAGTCCACACACTCACCAGGACCCTGGTTCCTTTTTT
AACATCGTAGCCAGCTACCTTGCAGTCTTCCCGACACTCACGTGGCACCAACATTGGTGCCACGGGGTGCAGACGCATAGTCTCTTTTGCAATTG
CCTCTATGTAAGGAAGATTCGGGATGTCTTTTTCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E379040] | SGN-U573255 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T698 [Download] [View] | Facility Assigned ID: 233_F05_TUS01N17.Td_045.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0038 | Quality Trim Threshold: 20.5 |
Working
