EST details — SGN-E379106

Search information 
Request: 379106Match: SGN-E379106
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C167649Clone name: TUS-1-A23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C3215 [cLEC-1-I15] Trace: SGN-T24549 EST: SGN-E200336 Direction: 5' Facility: TIGR
Clone: SGN-C3215 [cLEC-1-I15] Trace: SGN-T24550 EST: SGN-E200337 Direction: 3' Facility: TIGR
Clone: SGN-C167649 [TUS-1-A23] Trace: SGN-T1191 EST: SGN-E379901 Direction: 5' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E379106Length: 646 bp (809 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E379106 [] (trimmed) GATTCCGAATATGGATAATTATAACATTCTAATGAAAAAGTAGACTACACATGCATAATGCATACACCTCCAAGGCCCTCTAAAAAGATCTTTTT
TTTTTTTACTCGGAACTAAGTTATACTCTACAAGAGAGCAAATAGATCGAGTTATTAAATAACAAGTCGCCATTGGGTATGATTCTTGAAATAGC
CAAGACGACTATCAGCCAAACGTAATGAATACCCAATTTGTTTAAAGTCCCCCCACTTGAAAGGCTTATAAATATTAGTAATATTGTTGATTTGA
GGAGGAGCACTTATCCAAGGGCCAAAAGCAGGAGCTGCAAAGTACTTCATGGACATTCTACTTTTCCATGAATTTATTGACACCACTCTATGTCT
TACACTGGGAAATCTACCATTCGCCAACGCCTGAAAGGAGTCCCCTACGAAAACGAAGAACTCATTAGGATCAGGAGGAACGGGTATCCAAAATC
CCTCATGAGTATATATTTGAAGTCCACTAACGTCGTTTGATCGAAGGATTGTAAGTATTGGGGGATCAGTATGTGCTCCAAATCCAACTCTTGAT
TTTGATGGATTTGGGGATAGGCCCCAATGATTATTGTTAAGCCCATCTTGATTATCATCATTATTAGGCGTGACAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E379106] SGN-U568917 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T411 [Download] [View] Facility Assigned ID: 230_A11_TUS01A23.Td_081.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0155 Quality Trim Threshold: 20.5