EST details — SGN-E379146
| Search information |
| Request: 379146 | Match: SGN-E379146 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C168665 | Clone name: TUS-3-L7 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C7573 [cLEC-39-H15] | Trace: SGN-T31824 | EST: SGN-E208534 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C168665 [TUS-3-L7] | Trace: SGN-T598 | EST: SGN-E379386 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E379146 | Length: 689 bp (795 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E379146 [] (trimmed)
AAGATAAACCAAATGACTCTTAACTGTGTCTTTTGCCACCGTCTGTCCAGCACCCAGTTCTGGGAAAGGATACCTGACATACAGGGCAGAAAACA
AGAACCAAACAACAACATAAAAGACTGAACATGAGCAGGAAGAGTAAAGTATAGCAAGTTTTCATAACACACTTTATTATAGTAGATACTGATAT
CTCTGGTAACTCCAGAGTTGAACTGCACTATTCATTTTTTCTTCTGAGCAGCCTTGGTGACCTTGGCTCCAGATGGGTCCTTCTTGTCAACATTC
TTGATAACACCAACAGCAACAGTTTGACGCATGTCCCTCACAGCAAAACGTCCCAATGGTGGGTACTCGGAGAATGTCTCAACAACCATGGGCTT
GGTGGGAATCATCTTAACCATACCAGCATCACCGTTCTTCAAGAACTTAGGCTCCTTCTCGAGTTCCTTACCAGAACGCCTGTCAATCTTAGTCA
AGATCTCAGCAAACTTGACAGCAATATGGGAGGTGTGACAGTCCAGCACTGGAGCATATCCATTTCCAATCTGTCCTGGATGGTTCATGATGATG
ACCTGAGCGGTGAAGCTAGCAGCCCCCTTAGCTGGGTCATCCTTGGAGTTGGAAGCCACAAATCCACGTTTAAGATCCTTAACCGCAACATTCTT
GACGNTTAAACCAACATTATCACC
AGAACCAAACAACAACATAAAAGACTGAACATGAGCAGGAAGAGTAAAGTATAGCAAGTTTTCATAACACACTTTATTATAGTAGATACTGATAT
CTCTGGTAACTCCAGAGTTGAACTGCACTATTCATTTTTTCTTCTGAGCAGCCTTGGTGACCTTGGCTCCAGATGGGTCCTTCTTGTCAACATTC
TTGATAACACCAACAGCAACAGTTTGACGCATGTCCCTCACAGCAAAACGTCCCAATGGTGGGTACTCGGAGAATGTCTCAACAACCATGGGCTT
GGTGGGAATCATCTTAACCATACCAGCATCACCGTTCTTCAAGAACTTAGGCTCCTTCTCGAGTTCCTTACCAGAACGCCTGTCAATCTTAGTCA
AGATCTCAGCAAACTTGACAGCAATATGGGAGGTGTGACAGTCCAGCACTGGAGCATATCCATTTCCAATCTGTCCTGGATGGTTCATGATGATG
ACCTGAGCGGTGAAGCTAGCAGCCCCCTTAGCTGGGTCATCCTTGGAGTTGGAAGCCACAAATCCACGTTTAAGATCCTTAACCGCAACATTCTT
GACGNTTAAACCAACATTATCACC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E379146] | SGN-U580191 | Tomato 200607 | Build 2 | 66 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T984 [Download] [View] | Facility Assigned ID: 240_D07_TUS03L7.Td_058.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0034 | Quality Trim Threshold: 20.5 |
Working
