EST details — SGN-E379165

Search information 
Request: 379165Match: SGN-E379165
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C167740Clone name: TUS-1-E18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C167740 [TUS-1-E18] Trace: SGN-T444 EST: SGN-E378842 Direction: 3' Facility: Avesthagen
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E379165Length: 739 bp (811 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E379165 [] (trimmed) GAGCAATATCATACAGCTAAAGGAGAAAAGAAGAAGAGATTTTGTTACAAAAATATGGAACGAATTTCCTTAGCAAACAGTTACACACAGGTGAT
GATACATGCAAGAGCTTCTGATACTACAGTTGCACATCTTGCATAATATACAAGTATGGAAGCTCATATGAGTATAAAACTACAAGCTTTTCATG
TCAAAATGTTACATTTGATTATACAGGGGGAAAAGGGATGCACTAATTACTTTATTTCTCCCGCACCACTTTATATCTTGATGGCACAGATAACT
CAACCATTTACACCTACAATTACGCTCACAGGAACTGCAGTTAATGCTCATCCCTTGTTTGCATAAACAGACACATGTTAACTTCCTCAGGTGAT
TAATTAATGGTGTTTTCCCTCTGTAATTTAGGAATCACCACACTAAGCCCTTTCTTCTCCTAAACCTGTCAACACGATCTGTGCTCATCCGCGAC
TTCTCAGGTTTGTTTGACTTCTTAGTCTTTTCAAGTCGACTATCCAAACTGTTCCTTGAAATTTCAGGAAGATCAGGTTTCAGGTCAAACGTGTC
GGTGGTACTACCACTTTCGGCAGGTTTACTCTGATTTTCAGACTCTGTTGATGCTTTCTGGGGGCCATTAGCAGCAGGCTTCGGTTTGCCAAGAC
CAAGAACAAATTTCTTTAGATGTTTGATATACTCTGGGTAAAAGTCAAGATTGCAGTGTCCACCTCCATTTATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E379165] SGN-U575206 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T1222 [Download] [View] Facility Assigned ID: 244_E06_TUS01E18.T3_049.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0070 Quality Trim Threshold: 14.5