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EST details — SGN-E379180

Search information 
Request: 379180Match: SGN-E379180
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C167772Clone name: TUS-1-G2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C167772 [TUS-1-G2] Trace: SGN-T1164 EST: SGN-E380072 Direction: 5' Facility: Avesthagen
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E379180Length: 787 bp (804 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E379180 [] (trimmed) GGCTACCCACTTATAATATTGTCGGATATGAGGTATATATGATTACACATGTTCCAGAAAAATGGACTATGTTACACTGAGAACTAACATCATAT
TCAAAGTTATGTAGCTACTATCATCATATATCTATATGTTTACATTAATATAATATGTATAAACTGACAAAACTGGCATATTCTGCATAGATCAC
AACACCTTCACCACTTACAGCTCCTCCCCAAAAGAAAAAGAAGAAAACAATCTTGGCTGTTTTCTCCTTGACTTTCTCCTTTGACGTACGATTAC
CTTGCATGGAGAAGCACTCGAAGCACACTCTTCATCTTTGGCCGGCCTTCTGGTGATACACTGACACAAGCTAGAGCCAATTTGAGGACTGCTAA
CATCTGGCTCCTAACGTTGAGCGATGCCTTAGAAATGCTAGAATCCAGAATGTGATCCCACTTGCTGTGCTTCTCAGAGTTGCTCAGCACTGACT
TGGCTAACTCGGTTCCCTGACTAACTGCAGGCCTTCCTGTCAACAATTCCAGCAGAACGACCCCAAAGCTATATACATTTCCAGCCATTGTGACT
CTCATTGTGTATGCATATTCTGGAGGAATATAACCGACAGAACCAGCAACAGCAGAAAAGCTGCCTGTGCTCTTCGAAGGATCCATCACCTTGTA
GAGTTCAATGTCTCCTATCTGAGCCTCATTCTGGGACTTCAAGAAGATGCTCTTGCTGGAAAGGTCGAGGAGGAGGATTGGACCCTTGTCACATC
CATGAAGAAAAGGCTAACCCTGAGCTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E379180] SGN-U573289 Tomato 200607 Build 2 18 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T222 [Download] [View] Facility Assigned ID: 227_G02_TUS01G2.Td_018.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0038 Quality Trim Threshold: 20.5