EST details — SGN-E379185

Search information 
Request: 379185Match: SGN-E379185
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C168415Clone name: TUS-3-A21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C168415 [TUS-3-A21] Trace: SGN-T873 EST: SGN-E378870 Direction: 3' Facility: Avesthagen
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E379185Length: 740 bp (818 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E379185 [] (trimmed) TGTTTCTACAACACAACTCCTAATGCGTGGACATTAGCGTTGCGAATGGGCACTGTTCGTTCTGAATCACTCATGCGTTGGGTGTGGGAAGCAAA
CAGGGGAAACCCCGTTAAAGAAAACGCGACATTCACGTTTGGAACTAACGGAAATCTCGTATTGGCCGATGCTGACGGTCGAATCGCTTGGCAGA
GCAACACGGCCAATAAGGGGGTGACAGGGTTCAAGTTGTTACCTAACGGTAACATGGTGCTACATGACAAAAAAGGTAAATTCGTCTGGCAGAGT
TTCAACTATCCCACTGACACTTTACTAGTGGGCCAAACTCTCAGATTGTCCGGCCCGAATAAGCTTGTGAGCCGGGCCTCGGTGAAAAAGAATGC
GAACGGGCCTTATAGCTTGGTGGTGCAGCCGAGATTGTTTGCAGTCTACAAGGGAAACAAGGTTGACGTGGAATTAGCTTGGTTCGATTATGGAA
ATAACACATTGGAATCGATAAAATTAAATAGTGGGAATCAAAGATTGAAATTGGATTATAGATTTGCAAAATCAACACAAAGAAGTTCACATGTG
ATGGCATTTACTANATACAACACAACATTGACATATCTTAGACTTGAAATTGATGGAAATTTAAGGCCTATACTTTCGTTAGAGATGAAGAAGCA
GATGAATTCCGTTGGAAAGTAACTTACAGTANGATTTTAAACGTTTCATAAACGAAACGTATAAATCTACATACA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E379185] SGN-U569601 Tomato 200607 Build 2 89 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T329 [Download] [View] Facility Assigned ID: 229_A09_TUS03A21.T3_066.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.983 Expected Error Rate: 0.0098 Quality Trim Threshold: 14.5