EST details — SGN-E379360
| Search information |
| Request: 379360 | Match: SGN-E379360 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C168577 | Clone name: TUS-3-H15 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C168577 [TUS-3-H15] | Trace: SGN-T939 | EST: SGN-E379054 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E379360 | Length: 684 bp (774 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E379360 [] (trimmed)
GTCAAACAGGACATAAAGATTAAAGCTAGTGAAGAAGGTTTTGTTGAAGATATAAATGATCTTAAGGTTGAAAAGGAGAGAAAATCAATACATAA
CGAGGACGATAATTCGAAGTCCTCTCAGCAAAAGGATCTCACTGGGGACAAAAAGGACGATCAGCTGGAATCAGCCAAAGCCGATATGGAAGAAG
TAATGGAAGAAAATCAAAGGCTAAAGAAACACTTAGATAAAATCATGAAGGATTATCGGAATCTTCAAATGCAATTCCATGAAGTTGCACAAAGA
GATGCTGAAAAAACTAATACTGATGTTAAACATGACGAAGCTGAACTTGTTTCCCTTAGCCTAGGAAGGACTTCAAGTGACACAAAAAAGGAGTT
ATCCAAATTAATTTTGAGCAAAAAAGAGAATGATGAGAAGGAAGAAGATAACCTAACCCTAGCATTAGATTGCAAGTTTCAATCATCGACCAAAT
CTTCACCATCAAATCTCAGTCCAGAGAATAGTTTAGGAGAAGTGAAGGACGACGAAAAAGGAACTGATCAAACATGGCCACCTCACAAAGTTCTC
AAGACGATGAGGAATGAAGAAGATGATGTGACACAACAAAACCCTACTAAAAGAGCAAAGGTTTCCGTCAGAAGTAGATGTGACACCCCNACGAT
GAACGATGGATGTCAATGG
CGAGGACGATAATTCGAAGTCCTCTCAGCAAAAGGATCTCACTGGGGACAAAAAGGACGATCAGCTGGAATCAGCCAAAGCCGATATGGAAGAAG
TAATGGAAGAAAATCAAAGGCTAAAGAAACACTTAGATAAAATCATGAAGGATTATCGGAATCTTCAAATGCAATTCCATGAAGTTGCACAAAGA
GATGCTGAAAAAACTAATACTGATGTTAAACATGACGAAGCTGAACTTGTTTCCCTTAGCCTAGGAAGGACTTCAAGTGACACAAAAAAGGAGTT
ATCCAAATTAATTTTGAGCAAAAAAGAGAATGATGAGAAGGAAGAAGATAACCTAACCCTAGCATTAGATTGCAAGTTTCAATCATCGACCAAAT
CTTCACCATCAAATCTCAGTCCAGAGAATAGTTTAGGAGAAGTGAAGGACGACGAAAAAGGAACTGATCAAACATGGCCACCTCACAAAGTTCTC
AAGACGATGAGGAATGAAGAAGATGATGTGACACAACAAAACCCTACTAAAAGAGCAAAGGTTTCCGTCAGAAGTAGATGTGACACCCCNACGAT
GAACGATGGATGTCAATGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E379360] | SGN-U571278 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T395 [Download] [View] | Facility Assigned ID: 229_H03_TUS03H15.T3_030.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.945 | Expected Error Rate: 0.0068 | Quality Trim Threshold: 14.5 |
Working
