EST details — SGN-E379360

Search information 
Request: 379360Match: SGN-E379360
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C168577Clone name: TUS-3-H15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C168577 [TUS-3-H15] Trace: SGN-T939 EST: SGN-E379054 Direction: 3' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E379360Length: 684 bp (774 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E379360 [] (trimmed) GTCAAACAGGACATAAAGATTAAAGCTAGTGAAGAAGGTTTTGTTGAAGATATAAATGATCTTAAGGTTGAAAAGGAGAGAAAATCAATACATAA
CGAGGACGATAATTCGAAGTCCTCTCAGCAAAAGGATCTCACTGGGGACAAAAAGGACGATCAGCTGGAATCAGCCAAAGCCGATATGGAAGAAG
TAATGGAAGAAAATCAAAGGCTAAAGAAACACTTAGATAAAATCATGAAGGATTATCGGAATCTTCAAATGCAATTCCATGAAGTTGCACAAAGA
GATGCTGAAAAAACTAATACTGATGTTAAACATGACGAAGCTGAACTTGTTTCCCTTAGCCTAGGAAGGACTTCAAGTGACACAAAAAAGGAGTT
ATCCAAATTAATTTTGAGCAAAAAAGAGAATGATGAGAAGGAAGAAGATAACCTAACCCTAGCATTAGATTGCAAGTTTCAATCATCGACCAAAT
CTTCACCATCAAATCTCAGTCCAGAGAATAGTTTAGGAGAAGTGAAGGACGACGAAAAAGGAACTGATCAAACATGGCCACCTCACAAAGTTCTC
AAGACGATGAGGAATGAAGAAGATGATGTGACACAACAAAACCCTACTAAAAGAGCAAAGGTTTCCGTCAGAAGTAGATGTGACACCCCNACGAT
GAACGATGGATGTCAATGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E379360] SGN-U571278 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T395 [Download] [View] Facility Assigned ID: 229_H03_TUS03H15.T3_030.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.945 Expected Error Rate: 0.0068 Quality Trim Threshold: 14.5