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EST details — SGN-E379409

Search information 
Request: 379409Match: SGN-E379409
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C168476Clone name: TUS-3-D10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C168476 [TUS-3-D10] Trace: SGN-T281 EST: SGN-E378929 Direction: 5' Facility: Avesthagen
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E379409Length: 764 bp (808 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E379409 [] (trimmed) GCATAACTTTTCCCTAAAATTCTCCAAGAACAGAAGAGATGCTATCCGACTGCCTGTCAAAAGAAATCAATTAACCAATTGAACTGGTGCAGAGA
GTAGAATCTCAACAGACAACTTGAGCAAAGCTCGAAACTATAGACAATGGCCTATTGATGTCCTTGATTATGTGGTGGAGGCCCTGGCGGCAGTG
GCGGAGGCATTCCAGATTGATGACCAAAGTTTGACTGCATGTGCATTCCAGGAGGTGTGTTTGGATTTCCAGATTGCTGATAAGGATTAAGTCCA
GGCATGAGCGGCATCTGTCCAGCTTGTGGCCTGTTGAAGCCTCGTACTGGTGGAAACATCTGATTGCCTCCTGCATTTTGAGGGCCTTGCATGTT
TGGCAATCCATTTGGCATTCCACCAGGGGGAACATTGCCCTGCGGTCCAGATCCAGGAGGCATGCCAACAAAATGACCTTGAGGCATTGGAGGGC
CCATCTGATTCATGTTACCTTGTATCCCCATCGGAGGCATTCCTTGGATGGGTCCAGATCCTGGCATTGAAGACTGAATGCCGGGCATGTTTACT
GGTTGTAGTTGATGTGGTGGCCGAGGTAGATGAGGATGTGGCATTAGAGGCATATGTGGAGGCTGTAGCTGTGGCAAATTCGGTGGTTGCAAAGG
AAGAGAAGTCATTTGTTGAGGCAGTGACTGCTGCTGAGCTTGCTGCATGTTTTGATGATATGCTTGCTGCTGATTACTTGCAAGAAGCGATGGAT
GTGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E379409] SGN-U576241 Tomato 200607 Build 2 13 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T825 [Download] [View] Facility Assigned ID: 237_D10_TUS03D10.Td_080.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0064 Quality Trim Threshold: 20.5