EST details — SGN-E379515

Search information 
Request: 379515Match: SGN-E379515
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C167718Clone name: TUS-1-D20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C14983 [cLEC-9-N5] Trace: SGN-T24994 EST: SGN-E200700 Direction: 5' Facility: TIGR
Clone: SGN-C167718 [TUS-1-D20] Trace: SGN-T1214 EST: SGN-E379164 Direction: 5' Facility: Avesthagen
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E379515Length: 628 bp (809 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E379515 [] (trimmed) ATGTAGGAGATAGTCACATGAAGTTATTCCCCAACTTGCAGATTCTCATCCGACATTTGCATGTTCTTTAGCAAAAGAAAAGCAGCGGCATTACT
TGACCATAAGCTGTCTTCAGTTCTTCCTGTGTACCGGAGATGCATGCAGTGTTTGGTAGCATCATCCCACAAAATAAAGTTCGAGCAGCAAAGAG
AATAAATTAGTGTAAGATCTCCATAACAAAGATGTCTACATCTTGTCATGGAGAGACACCACCAAGTCATGGGCATCATCTAGAAGCTTCCATAC
ATCCAGTTGACCAGCCATGCTCTGGCACTCCCTTAAAATTTCATCCATGCTACTATACTTCTCTATGATCTGTTTCCTCCGTTGCAATACAGATG
CTGCAATTGCATAAAGCAAGAGATCATCTGTTGGTGGGGCACGCAGCCTAATCCTACTCCAGGCAGACTTGCCAATCCCAGCCCTAATAGCAGCC
TGGTCTGCCCACATTACTTCCCATAGGCAGAGCGTTTGCTCAAAAGATAATTCCCGCCTGACAAGAACTACCACCATTCTGTACACGAAAAAGCA
ATCCTCTGCTTGGAGCTTCTCCAAGCGTCGATAGAGATGTGCATACTTTTGTTTGATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E379515] SGN-U567837 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T436 [Download] [View] Facility Assigned ID: 230_D08_TUS01D20.Td_062.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0092 Quality Trim Threshold: 20.5