EST details — SGN-E379549

Search information 
Request: 379549Match: SGN-E379549
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C168002Clone name: TUS-1-P16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C168002 [TUS-1-P16] Trace: SGN-T156 EST: SGN-E378914 Direction: 5' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E379549Length: 732 bp (776 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E379549 [] (trimmed) CATTGAAAGAGTTATAATCTAAGGAAAGTTACATATTTGGTCGGCCGGCCAAAATAATTACATTCGCCTAGCCAACTATATATAAAAAAGATACA
CTATTTGTATATTATATGTATTTCAATACAATAATATACAAAAATAATACTCTAATAATATACATTTGCTATGGTCTTCAATTCATAGTTTGATT
GTAGGACCATCATATGTTCCTCCTAACACAACAAACTGCTCATCTTTTCGTTCTTCAAGCCATGCATATGATCTTTTCTCATCTTCCTTCATCTC
TTTATTAACATCGGATAAACTTATGTGATCATACGAGTAATGTTGATAATATGTGCAATGACGGCCTTCAGCTTCAGAGTATGGTGGTCCTAAAA
CATCAAGTAGGATACATGGTGTTATTGCCTTGAAGCAATGCATGTTTCCTCCTGATTCTGGAAATAGAACTGAAGATTTGCATGGTGCAGAGAAG
TCATCGTCAACATGTACTTTTGCCAGCCTCATCCTAGATTCATGTTGCCCGCGATCGTGGTTAGCCTGGTGGTTGTGATTTTGCACCCAATCATA
TGACGTGGTGTGCATGGTTCCTGCTAGAAGCTTGCAGAACACAGTCATGCCAGGATGATTATGAAGAGGGATTACTCCTGAAGGTGGCAAACAGA
AGATCCCCATCGAAAATTTGTTGCATTCGTGGATCTTAATGTAGGTAACAAGAGGAGCTTCCACGGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E379549] SGN-U571592 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T717 [Download] [View] Facility Assigned ID: 233_H04_TUS01P16.Td_042.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0022 Quality Trim Threshold: 20.5