EST details — SGN-E379602

Search information 
Request: 379602Match: SGN-E379602
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C167702Clone name: TUS-1-D4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C1492 [cLEC-12-L20] Trace: SGN-T25886 EST: SGN-E200301 Direction: 5' Facility: TIGR
Clone: SGN-C167702 [TUS-1-D4] Trace: SGN-T196 EST: SGN-E379337 Direction: 3' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E379602Length: 712 bp (783 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E379602 [] (trimmed) CGGATTTTCTTCTTCTTCTTCTTCATCTCTATCAACTCTTCGAAAATCCTTTACTTCCACTTCGCCTATTTTCCCTTCATTCCATTCTCTGCTTC
CGCGAATTCCAAAACCTTCATCACTCAAAACGGTAAACCCAACCTTCAAACCCTCCCTACCACGCCGATTCTCCTCCGCTGTTGCCGCCACCGCC
GATTCCGCCGAAGTTAGACAATCCCTCAAAACTCGCTTGAAAAATGGAGAAACCCTTTACGGCATTTTCCTTCTCGGTTTCTCTCCAACCCTCGC
TGAGATCGCTGGACTCGCCGGATACGACTTCGCCGTCGTCGATATGGAACATGGTCACGGAGGTATCTCCGATGCACTCCCTTGTCTTCATGCCT
TAGCCGCTACTCAAACCCCAGCTATTCTCCGTATCCCTGAATCCTCAGCTACTTGGGCTAAAAAAGCCCTCGATCTCGGCCCACAGGGCATTATG
TTTCCGATGATCGACGGTCCGAAATCAGCCCGAAAGGCAGTGTCTTACTGCCGTTTCCCGCCTAATGGCGTACGTGGATCTGCTCATACTGTTGT
TAGAGCTTCGAGCTATGGAATTGATGAAGGGTATTTGAGTAATTACGAGGATGATCTACTGATCATGTGTCAAGTTGAGTGTGTAGATGGAGTGA
AGAAGATTGATGAAATTGCAGCAGTGGAAGGGGTTGATTGTATTCAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E379602] SGN-U582679 Tomato 200607 Build 2 15 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T1138 [Download] [View] Facility Assigned ID: 243_D04_TUS01D4.T3_032.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0030 Quality Trim Threshold: 14.5