EST details — SGN-E379628

Search information 
Request: 379628Match: SGN-E379628
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C167751Clone name: TUS-1-F5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C1000 [cLEC-10-G22] Trace: SGN-T24705 EST: SGN-E201118 Direction: 5' Facility: TIGR
Clone: SGN-C167751 [TUS-1-F5] Trace: SGN-T1156 EST: SGN-E378987 Direction: 5' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E379628Length: 768 bp (809 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E379628 [] (trimmed) TCGTCGAAAACACATTCCACAAGCAATCATAAGTAACTACAGCTAAGAGTACTTGACAAAACTGCATTTTGTCACTGAAATCAGAAACACAAACA
TCTTCTGGTGTACATTACAAGCAAAAGTTCAAGCTTTATCGCGTTTTAACATGAACAATAACGCGTTTACTGCAGAAAATCTCGAGGATCAGTAA
CATGGCCAGTTAATGCAGATGCTGCAGCTGTATATGGAGATGCAAGATAAATTTGACCTTCCTTGTGGCCCATTCGCCCCGGGAAGTTCCTGTTT
GTGGTTGAGACACATACCTGAGGTTCGTTCAACCGAGCATGAGTATCTCTAGGACCACCCATACAAGCACCACAACTAGGACTTGCTGGTGTATC
GCAGCCAGCATCCTCGAAAATCTGTGAACATGTTTTGCCACCAGATTCTGGAACTGGGATAGTATATAAATCCATCCAGACCTTCTGCGTAGCAG
GGACGAGAAATGTTGGAACTTTGACCTTCTTTCCTGATGCTAGAAAAACTTTGGCAGCAGCCATGAAGTCTTCTGTTTTCCCACCGGTACAAGAT
CCAATATATACTCTGTCAATCTTAACATCTTCGCATTCTCTTGCCAAAGCACGATTGCCAGGAGAATGAGGCTTTGCTACTAAGGGCTCCAACTT
TGAGATGTCGAAATGATACTTAGCAAGAAACCTGGCTTGCTCATCACTGTAGACAGGTTCATAATGCACAGTAGTCTTGTCCTTAANGGTAGTCA
TATGTTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E379628] SGN-U576272 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T214 [Download] [View] Facility Assigned ID: 227_F05_TUS01F5.Td_045.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.985 Expected Error Rate: 0.0026 Quality Trim Threshold: 20.5